Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8 156 4e-33 seq25 116 3e-21 seq64 91.5 1e-13 >seq8 Length=557162 Score = 156 bits (172), Expect = 4e-33 Identities = 1021/1615 (63%), Gaps = 68/1615 (4%) Strand=Plus/Plus Query 138424 CCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAAC--TTGATCA 138481 ||||| | ||||||||||| || |||||| || ||||| | || | || || Sbjct 459119 CCGTTATCGGCAATGATGCGGTTCTTCATGTTCTCAGACCACAGA--CCACGGTCGA-CA 459175 Query 138482 AG-TCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACG 138540 || || || | ||| || ||| | |||||| || || |||||||| || ||||| | Sbjct 459176 AGATCCTTCAGCAGCCATGGGTTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAG 459235 Query 138541 TAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTC 138600 || |||||| | ||| | ||||| || | || ||| |||| ||||| | || | Sbjct 459236 TAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGAT 459295 Query 138601 GCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCC 138660 ||||| ||||| || || | || || || || | ||| || | ||| || Sbjct 459296 GCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCC 459355 Query 138661 TTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAAC 138720 |||||| | ||||||||||| || |||| | ||| |||||| |||||||| | | Sbjct 459356 TTGAGCTCGGCCCAGTCCCACAGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGAAGC 459415 Query 138721 ATTCCCAAACTTGCG-----GGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCG 138775 || | |||||| ||| ||| | ||| | |||||| ||||| || | | Sbjct 459416 --TCGC---CTTGCGATACTGGAGAGCCCTGGTAAGTCTCGTATGGACCAAGCTTCTCGG 459470 Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835 | | |||| ||||| || || ||| ||| || || ||| || || |||| Sbjct 459471 CAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGA 459530 Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCC 138895 || |||||||| ||| | ||||| ||||| | ||| || || || || | Sbjct 459531 GCTCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGAC 459590 Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATA- 138954 | | || |||| || | ||| || || || | | ||| | ||| | | || | || Sbjct 459591 CGTTGACACCCAGACCAATAGGTCGGTGACGGA-AGTTG-CTCTTCCGTGCCTCTGGTAC 459648 Query 138955 -GGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATG 139013 || |||||||| | |||||| | ||||| || || || ||| ||||| || | Sbjct 459649 TGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGAGTGACAACCTTGGT-GACCT 459707 Query 139014 CTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGT 139072 | | || | | | || ||| | || |||| | ||| ||| || | ||| Sbjct 459708 CGTGAAGCTTCTTGAAGTCGAA---AACCTCGTTTT------CGATGTCAAC--GTATGT 459756 Query 139073 TGACACA--AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGAC 139130 | || | || |||||| | |||||| || || || || || || | ||| || | Sbjct 459757 CGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTACTCCAT 459816 Query 139131 AATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCG 139190 ||||| | ||||| || || ||||| || || | || | || ||||| || || Sbjct 459817 GATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCG 459876 Query 139191 GTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAA- 139249 ||| ||||| ||||| || || | ||||||||||| || || | || | || Sbjct 459877 GTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAAT 459936 Query 139250 TGAATTTGAACAAGTC-CCTAGCTTGTATTTGACGCACGTAAAGTT--CGTCGCGCTCGT 139306 || || | || || || | | | | |||| | || | || | ||| | Sbjct 459937 TGCAT---ACCAGATCTTCTGGGCGCGAACGGTCTCACG-ACCCTTACCTTCTCTCTCAT 459992 Query 139307 ACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGT 139366 | |||||||| || | ||| ||||||||| ||||||| | | | |||| | Sbjct 459993 ATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCAT 460052 Query 139367 CAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAA 139426 || ||||| || | ||| ||||||| || ||||||| |||||| ||||| || | Sbjct 460053 TGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGA 460112 Query 139427 TCCACAAAGCGAACAGCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACG 139481 |||| | ||| | | | |||||| || |||| | | ||| | ||||| Sbjct 460113 TCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCG--TGGTTCTTACG 460170 Query 139482 TTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541 | || | ||| | ||| || || ||||||||||| || || |||||||| | || Sbjct 460171 ---GAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGC 460227 Query 139542 GCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598 ||| || |||||||| || ||||||| || ||| || ||| | || | ||| Sbjct 460228 ACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAA 460287 Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGAT---GGGACTGTTGCGAGC 139655 |||||| | |||||| | | ||| |||||||||| || ||| || || | ||| Sbjct 460288 CATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCAGT---AGC 460344 Query 139656 TCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-AT 139714 |||| | || |||| | || || ||||| | ||||| || | | | || | Sbjct 460345 ACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGT 460404 Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774 | | | || ||||| || || |||||||| |||| ||| | | || ||||| | Sbjct 460405 CTTG-AGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGG 460463 Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834 | | | || | | | || || || || || || || ||| || ||||| Sbjct 460464 AAGCCAACTGGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAGT 460523 Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894 | |||||| | | ||| || || || || | ||||||| ||||||||||| Sbjct 460524 ACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCGTGGATAC 460583 Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954 |||| | || ||||| | ||| || || | || || ||| ||| |||||| | Sbjct 460584 CGACCGCCACACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGTCGATTCTGA 460643 Query 139955 tCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 || || | || ||| || |||||| |||| |||||| |||||||| ||| Sbjct 460644 GAAGGTATGATCG--CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCG 460696 >seq25 Length=313491 Score = 116 bits (128), Expect = 3e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || ||||| || || ||||| ||||| || ||| | | Sbjct 101462 ATGCAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTCA 101403 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || ||| ||||| || || || || || || || || Sbjct 101402 GACACTATCGACAACGTTAAGTCGAA-GATTCAAGATAAGGAGGGCATCCCACCTGACCA 101344 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATT-CGAGAAACATGTCAGATTATA 24881 || ||| | ||||| || || || ||||| |||||| | || || | ||||| || | Sbjct 101343 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGGACACTT-TCAGACTACA 101285 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||| || ||||| || || || |||||||||||||| |||| || ||| Sbjct 101284 ACATCCAGAAGGAGTCTACCCTGCACTTGGTGTTGCGCCTGCGTGGTGGC 101235 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || || || ||||| || || | | Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| |||||| | | | | || || ||| Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAAC 101511 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || |||||||| || |||||| | ||| | || | || || ||| Sbjct 101510 ATCCAGAAGGAATCCACGCTACACCTTGTGCTCCGCCTCCGTGGTGGC 101463 >seq64 Length=168546 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| | ||| | || || || || || || || || ||||||||||| || | | ||| Sbjct 20609 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGA 20668 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 ||| | || | || || |||||||||||||| || || || || || || || || Sbjct 20669 CACCATCGACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCA 20728 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 ||||||||||| ||||| || ||||| || ||| | | |||| || || ||||| Sbjct 20729 GCGTTTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACAT 20788 Query 24886 TCAAAAGG 24893 ||| |||| Sbjct 20789 TCAGAAGG 20796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894838753480