Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq40 111 1e-19
seq25 95.1 1e-14
>seq40
Length=240523
Score = 111 bits (122), Expect = 1e-19
Identities = 200/290 (69%), Gaps = 8/290 (3%)
Strand=Plus/Minus
Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378
||||||| ||||| | || ||| || | || |||||| |||||| ||||| ||
Sbjct 232392 CAGTCTCGGGGTTCTTGCAGTCCCTGCAGAGGACGAACTTGTTGATGAAGCCATCGAGGT 232333
Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||| || | ||| || ||||| | ||||||| ||| | || |||| ||| |
Sbjct 232332 AGTCTTGCAGCTTCGTGGCCTCGTGTGCACCGTTGATGATCCAGCGATCGTCCTTGGGGT 232273
Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498
| | | || || ||||| |||||| | || ||||| |||| | | || || | |
Sbjct 232272 CAATGTTGGTCTGGGCGCCAAGCTCGAAGCCAAAGTA-TTTGATG---ACATAGCTTGGC 232217
Query 34499 GTCCAAGCGCCTTGG----CGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554
| | |||| |||| ||| | || | |||||||| || |||||||| ||||||
Sbjct 232216 GGGCGAGCGAGTTGGTAGGCGACATTGGCAAGGTTGACGACAACGGTCTTGATACCGTTG 232157
Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604
||||||||||| ||||||| ||| ||| ||| ||||||||||||||
Sbjct 232156 CCCTTTCCTTCCACCTTGGACTGGATACGCTCCATCTTGTAGCGGTAGAA 232107
>seq25
Length=313491
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||||||||| || || | |||||||| || ||||| |||| ||| ||
Sbjct 101462 ATGCAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTCA 101403
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | | || || ||||||| || || || ||| | || || ||
Sbjct 101402 GACACTATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 101343
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | || ||||| ||||| ||||||| | | ||| | | || ||||||
Sbjct 101342 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGGACACTTTCAGACTACAAC 101283
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || ||||| ||||| ||||||| | ||||| || ||
Sbjct 101282 ATCCAGAAGGAGTCTACCCTGCACTTGGTGTTGCGCCTGCGTGGTGG 101236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412839129530063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |