Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq52 156 7e-32
seq6 154 2e-31
seq31 129 9e-24
seq85 120 5e-21
seq8 96.9 5e-14
seq97 87.8 3e-11
>seq52
Length=200596
Score = 156 bits (172), Expect = 7e-32
Identities = 177/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| |||| ||||| ||| | |
Sbjct 99321 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCGAGTTCACCGGGGAG 99262
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT-AGTGC 1485589
|||||| ||||| | |||||||||||||| | ||| || |||||| |||
Sbjct 99261 GATCAGTCGCACCGATGTCTGGATCTCGCGCGATGAGATGGTCGACTTCTTGTTGTATGC 99202
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| ||| ||| |||| ||||||||||| || ||||| |
Sbjct 99201 G-GCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAGGAGTTTA 99143
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| ||||| | ||||||||| || ||| ||||| ||||||||||||||
Sbjct 99142 GGATGGACATTGCGCGGTTGGAGATACCAGTGTCTGGGTGGACCTGCTTGAGCAC 99088
>seq6
Length=666260
Score = 154 bits (170), Expect = 2e-31
Identities = 124/150 (83%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
||||||||||| | ||||| ||| | |||||||||||||||||| | |||||||||
Sbjct 211139 AGGTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCGCCAACTACATGGACATCAAGG 211080
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
|||| ||||| | || ||||||||||| |||||| | ||||||||||||||||| ||||
Sbjct 211079 CCCTGCTCGACGTCGGCTGCAAGACCGTCGCCAACATGATCAAGGGCAAGTCGCCAGAGG 211020
Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||| ||||| || |||||| || |||
Sbjct 211019 AGATCCGAAAGACATTCAACATCCAGAACG 210990
>seq31
Length=267444
Score = 129 bits (142), Expect = 9e-24
Identities = 183/257 (71%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| |||||||| |||||||| || ||| |||||| |||||||||||||| | |
Sbjct 239008 TGACACCCGCCTTTTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 238949
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | |||| ||||| | ||||
Sbjct 238948 GTGAGATGTTCTCCATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 238889
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | ||||||||||||||| ||||| || ||||| || ||||||| | |||||||
Sbjct 238888 GTGCCAAAAGCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCA 238829
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||||| ||| ||||| | || ||| ||||| | ||| || | || ||||
Sbjct 238828 TGCCGAGAAGCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCT 238769
Query 794131 ---CGATGATGATCTGC 794144
|||||||| |||||
Sbjct 238768 CAACGATGATGCTCTGC 238752
>seq85
Length=115538
Score = 120 bits (132), Expect = 5e-21
Identities = 301/456 (66%), Gaps = 16/456 (4%)
Strand=Plus/Plus
Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979
|| |||| || |||||||| | ||||||||||| || |||||| | || | |
Sbjct 66924 GGGTCGAGAAATACCGCCCCGTCTTCCTCGACGACATAGTTGGCAACACCGAAACCATCG 66983
Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039
|||||| | ||| ||||||||||||||| || || | | || ||
Sbjct 66984 AGCGCCTCAAAATCATCGCCAAAGACGGCAACATGCCCCACGTCATCATCAGCGGTATGC 67043
Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCG---TGCTCTTGGGCGCGG 2019096
|||||| ||||||||||| | || ||| || || || ||||| ||| | |
Sbjct 67044 CCGGCATAGGCAAGACCACATCCGTCCTGTGTCTCGCACGACAATTGCTC---GGCCCAG 67100
Query 2019097 CCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGC 2019156
| | ||||| ||||||||||| || || |||||||||||||| | |||||||||
Sbjct 67101 CATATAAGGAGGCAGTGCTCGAACTGAACGCATCAGACGAGCGCGGAATCGACGTCGTGA 67160
Query 2019157 GTAGAATCATCAAGCATCACGCTTCGAAAAGAA-----TCGACCTGCCGCCCGGCCGCCA 2019211
| | | ||||| | |||||| | |||| || || || | || || ||
Sbjct 67161 GGAACAGGATCAA-----AGGCTTCGCACAGAAAAAGGTCACACTCCCCGCTGGACGGCA 67215
Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271
||| | | || || |||||||| ||| | | ||| | || |||||||| || ||
Sbjct 67216 AAAGATTGTGATTCTAGATGAGGCGGACAGTATGACGAGCGGAGCACAGCAGGCTCTACG 67275
Query 2019272 ATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTC 2019331
| ||||||||||| |||| || |||||| || ||||| | || ||||| ||||
Sbjct 67276 ACGGACCATGGAAATCTACAGCAGCACGACCCGTTTTGCTTTCGCGTGCAATCAGTCGAA 67335
Query 2019332 GATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCAT 2019367
| | ||||||| | || ||| || ||||| ||
Sbjct 67336 TAAGATCATCGAGCCGCTTCAGTCACGGTGCGCGAT 67371
>seq8
Length=557162
Score = 96.9 bits (106), Expect = 5e-14
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||| ||| |||| ||||||||||| || ||| |||||||||||||||||||| |
Sbjct 460113 TCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGA 460172
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996
|||| | | | | || ||||||||||| ||||| |||||| ||||||||| ||
Sbjct 460173 GGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTG 460232
Query 2071997 TGCGCTTGCCGCCGCC 2072012
||||||| ||| ||
Sbjct 460233 GGCGCTTGTTGCCACC 460248
Score = 93.3 bits (102), Expect = 7e-13
Identities = 181/265 (68%), Gaps = 2/265 (1%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| ||||| || |||| ||| | || | | ||| || ||||| ||||||||
Sbjct 460249 CTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTGGA 460308
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGC-GGCAAAGC 2073658
|||||||||||| | | |||| || | || || | ||||| | ||| | |
Sbjct 460309 TGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAACATGCAGA-C 460367
Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718
| || ||||| || ||||||||| | || || | || || || ||||||||||| |
Sbjct 460368 CAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGATGCCGT 460427
Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778
|||| ||| |||||||| | | || ||||| || | || | ||| || |
Sbjct 460428 CGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTTC 460487
Query 2073779 CGGCATTGAAGAGCGTGGGCGTCGC 2073803
| || |||| ||||| |||| |||
Sbjct 460488 CAGCGCTGAAAAGCGTTGGCGACGC 460512
>seq97
Length=101030
Score = 87.8 bits (96), Expect = 3e-11
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|||| || |||||||||||||| ||| ||||| || || |||||||| ||||||| |
Sbjct 4668 GCAAGGGTGAAGATCTTGCGCTGATCGACACCGCCGAATTGAGCGTCGACATCGAGGTAC 4609
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2411593
|| ||||| | ||||||||||| |||||||
Sbjct 4608 TGTTCGTCCAATGCCTGCATGAGTGGGTAGA 4578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916194170090549
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |