Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq52 156 7e-32 seq6 154 2e-31 seq31 129 9e-24 seq85 120 5e-21 seq8 96.9 5e-14 seq97 87.8 3e-11 >seq52 Length=200596 Score = 156 bits (172), Expect = 7e-32 Identities = 177/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| ||||| ||| | | Sbjct 99321 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCGAGTTCACCGGGGAG 99262 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT-AGTGC 1485589 |||||| ||||| | |||||||||||||| | ||| || |||||| ||| Sbjct 99261 GATCAGTCGCACCGATGTCTGGATCTCGCGCGATGAGATGGTCGACTTCTTGTTGTATGC 99202 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||||| ||| ||| |||| ||||||||||| || ||||| | Sbjct 99201 G-GCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAGGAGTTTA 99143 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| ||||| | ||||||||| || ||| ||||| |||||||||||||| Sbjct 99142 GGATGGACATTGCGCGGTTGGAGATACCAGTGTCTGGGTGGACCTGCTTGAGCAC 99088 >seq6 Length=666260 Score = 154 bits (170), Expect = 2e-31 Identities = 124/150 (83%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||||||| | ||||| ||| | |||||||||||||||||| | ||||||||| Sbjct 211139 AGGTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCGCCAACTACATGGACATCAAGG 211080 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| ||||| | || ||||||||||| |||||| | ||||||||||||||||| |||| Sbjct 211079 CCCTGCTCGACGTCGGCTGCAAGACCGTCGCCAACATGATCAAGGGCAAGTCGCCAGAGG 211020 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||| ||||| || |||||| || ||| Sbjct 211019 AGATCCGAAAGACATTCAACATCCAGAACG 210990 >seq31 Length=267444 Score = 129 bits (142), Expect = 9e-24 Identities = 183/257 (71%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| |||||||| |||||||| || ||| |||||| |||||||||||||| | | Sbjct 239008 TGACACCCGCCTTTTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 238949 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||||| | |||| ||||| | |||| Sbjct 238948 GTGAGATGTTCTCCATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 238889 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | ||||||||||||||| ||||| || ||||| || ||||||| | ||||||| Sbjct 238888 GTGCCAAAAGCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCA 238829 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| ||| ||||| | || ||| ||||| | ||| || | || |||| Sbjct 238828 TGCCGAGAAGCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCT 238769 Query 794131 ---CGATGATGATCTGC 794144 |||||||| ||||| Sbjct 238768 CAACGATGATGCTCTGC 238752 >seq85 Length=115538 Score = 120 bits (132), Expect = 5e-21 Identities = 301/456 (66%), Gaps = 16/456 (4%) Strand=Plus/Plus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || |||| || |||||||| | ||||||||||| || |||||| | || | | Sbjct 66924 GGGTCGAGAAATACCGCCCCGTCTTCCTCGACGACATAGTTGGCAACACCGAAACCATCG 66983 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 |||||| | ||| ||||||||||||||| || || | | || || Sbjct 66984 AGCGCCTCAAAATCATCGCCAAAGACGGCAACATGCCCCACGTCATCATCAGCGGTATGC 67043 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCG---TGCTCTTGGGCGCGG 2019096 |||||| ||||||||||| | || ||| || || || ||||| ||| | | Sbjct 67044 CCGGCATAGGCAAGACCACATCCGTCCTGTGTCTCGCACGACAATTGCTC---GGCCCAG 67100 Query 2019097 CCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGC 2019156 | | ||||| ||||||||||| || || |||||||||||||| | ||||||||| Sbjct 67101 CATATAAGGAGGCAGTGCTCGAACTGAACGCATCAGACGAGCGCGGAATCGACGTCGTGA 67160 Query 2019157 GTAGAATCATCAAGCATCACGCTTCGAAAAGAA-----TCGACCTGCCGCCCGGCCGCCA 2019211 | | | ||||| | |||||| | |||| || || || | || || || Sbjct 67161 GGAACAGGATCAA-----AGGCTTCGCACAGAAAAAGGTCACACTCCCCGCTGGACGGCA 67215 Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271 ||| | | || || |||||||| ||| | | ||| | || |||||||| || || Sbjct 67216 AAAGATTGTGATTCTAGATGAGGCGGACAGTATGACGAGCGGAGCACAGCAGGCTCTACG 67275 Query 2019272 ATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTC 2019331 | ||||||||||| |||| || |||||| || ||||| | || ||||| |||| Sbjct 67276 ACGGACCATGGAAATCTACAGCAGCACGACCCGTTTTGCTTTCGCGTGCAATCAGTCGAA 67335 Query 2019332 GATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCAT 2019367 | | ||||||| | || ||| || ||||| || Sbjct 67336 TAAGATCATCGAGCCGCTTCAGTCACGGTGCGCGAT 67371 >seq8 Length=557162 Score = 96.9 bits (106), Expect = 5e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| |||| ||||||||||| || ||| |||||||||||||||||||| | Sbjct 460113 TCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGA 460172 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 |||| | | | | || ||||||||||| ||||| |||||| ||||||||| || Sbjct 460173 GGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTG 460232 Query 2071997 TGCGCTTGCCGCCGCC 2072012 ||||||| ||| || Sbjct 460233 GGCGCTTGTTGCCACC 460248 Score = 93.3 bits (102), Expect = 7e-13 Identities = 181/265 (68%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| | || | | ||| || ||||| |||||||| Sbjct 460249 CTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTGGA 460308 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGC-GGCAAAGC 2073658 |||||||||||| | | |||| || | || || | ||||| | ||| | | Sbjct 460309 TGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAACATGCAGA-C 460367 Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718 | || ||||| || ||||||||| | || || | || || || ||||||||||| | Sbjct 460368 CAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGATGCCGT 460427 Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778 |||| ||| |||||||| | | || ||||| || | || | ||| || | Sbjct 460428 CGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTTC 460487 Query 2073779 CGGCATTGAAGAGCGTGGGCGTCGC 2073803 | || |||| ||||| |||| ||| Sbjct 460488 CAGCGCTGAAAAGCGTTGGCGACGC 460512 >seq97 Length=101030 Score = 87.8 bits (96), Expect = 3e-11 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 |||| || |||||||||||||| ||| ||||| || || |||||||| ||||||| | Sbjct 4668 GCAAGGGTGAAGATCTTGCGCTGATCGACACCGCCGAATTGAGCGTCGACATCGAGGTAC 4609 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2411593 || ||||| | ||||||||||| ||||||| Sbjct 4608 TGTTCGTCCAATGCCTGCATGAGTGGGTAGA 4578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916194170090549