Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq64 122 6e-23
seq12 120 2e-22
seq25 113 3e-20
>seq64
Length=168546
Score = 122 bits (134), Expect = 6e-23
Identities = 147/198 (74%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 34782 TGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGG 34841
||| | ||||||||||||| |||||||| || |||| |||| || || ||||||||||
Sbjct 20802 TGCGCACCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGG 20743
Query 34842 CGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGA 34901
||||||||| || |||||||| | || | ||||||||||| | || || ||||
Sbjct 20742 CGAAGATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGA 20683
Query 34902 CGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
| || | ||||| || | | |||||| || | || |||||||| || ||||||
Sbjct 20682 C--AT--TGTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGG 20627
Query 34958 GTCTTTACAAAGATCTGC 34975
|||||||| ||| | |||
Sbjct 20626 GTCTTTACGAAGCTGTGC 20609
>seq12
Length=397188
Score = 120 bits (132), Expect = 2e-22
Identities = 98/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||||||||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 53191 AGGACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 53250
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || |||||||| | || | ||||||||||||
Sbjct 53251 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATCCCCTCCTTGTC 53309
>seq25
Length=313491
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | ||| |||||||| ||||| ||||| ||| |||| ||||
Sbjct 101479 AGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 101538
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| | || | |||||||||||
Sbjct 101539 TCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC 101598
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | ||| || || | ||| ||||||
Sbjct 101599 TGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTC 101658
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| || |||||||||||
Sbjct 101659 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Score = 102 bits (112), Expect = 5e-17
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||||||||||||||||||||| ||||| ||| |||| ||||
Sbjct 101707 AGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCC 101766
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || |||||||||| || |||||||| | || | |||||||||||
Sbjct 101767 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 101825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690851033929
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |