Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq25 87.8 1e-12
>seq25
Length=313491
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || || | || || ||| || || |||||||| || ||
Sbjct 101692 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 101751
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||||| ||| ||||| || ||||| || | ||||| | ||||| ||||| |||
Sbjct 101752 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 101811
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| ||||| || | || || ||| | || | ||||||||| || ||
Sbjct 101812 ATACCCTCCTTGTCCTGGATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACC 101871
Query 29740 TCAAGAGTTATAGTTTTGCCAGT 29762
|| || || || || ||||||||
Sbjct 101872 TCGAGGGTGATTGTCTTGCCAGT 101894
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||| | || ||||||||||| || || ||||| || || | |||||| |
Sbjct 101476 CGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCA 101535
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || ||||| || | |||| | ||||| || || || || ||||| |||
Sbjct 101536 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTG 101595
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | ||||| | || | ||||| || || || || || || ||
Sbjct 101596 TCCTG-AATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGAT 101654
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || ||||| || || || ||||||||
Sbjct 101655 GGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385216894824231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |