Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq25 87.8 1e-12 >seq25 Length=313491 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || || | || || ||| || || |||||||| || || Sbjct 101692 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 101751 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| ||||| || ||||| || | ||||| | ||||| ||||| ||| Sbjct 101752 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 101811 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || || ||| | || | ||||||||| || || Sbjct 101812 ATACCCTCCTTGTCCTGGATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACC 101871 Query 29740 TCAAGAGTTATAGTTTTGCCAGT 29762 || || || || || |||||||| Sbjct 101872 TCGAGGGTGATTGTCTTGCCAGT 101894 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | || ||||||||||| || || ||||| || || | |||||| | Sbjct 101476 CGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCA 101535 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| || | |||| | ||||| || || || || ||||| ||| Sbjct 101536 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTG 101595 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | ||||| | || | ||||| || || || || || || || Sbjct 101596 TCCTG-AATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGAT 101654 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || ||||| || || || |||||||| Sbjct 101655 GGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385216894824231