Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq31 89.7 5e-13
seq25 86.0 6e-12
>seq31
Length=267444
Score = 89.7 bits (98), Expect = 5e-13
Identities = 351/541 (65%), Gaps = 17/541 (3%)
Strand=Plus/Plus
Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256
||||||| ||||||| || ||||| | ||||| |||| || ||||| ||| |||||
Sbjct 238466 TCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGCTGACTGGGCGTTGCGATGGA 238525
Query 50257 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50316
||||||| || || ||| || || || || || ||| ||||| |||
Sbjct 238526 TCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCTTTCGCCGCTGTTGAGGGTA 238585
Query 50317 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCC 50375
| || ||||||||| ||| || ||||| || | | || || | | | | | ||| |
Sbjct 238586 TCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGTC-TCATGGCT 238644
Query 50376 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50435
||||| || || |||||| | || || || || || || |||||||||||||| ||
Sbjct 238645 GGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTATGCACACAGACTTCGCC 238704
Query 50436 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTA-TCATACGAAACAATTTTGGA--- 50491
||| || | | | ||| | |||| || | || | | || || || |
Sbjct 238705 TGT-----CTCCTGTTCTCGC--ACTTGAAGAACAAGCCAGATCAGGCACTTGTGCAGAG 238757
Query 50492 CATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGC 50551
||| || || || || | || || | ||||| |||| || ||| | || ||
Sbjct 238758 CATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGATGCTCT-GCCATGCA 238816
Query 50552 A-TTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGAT 50610
| | | ||||||||||| | | |||| | ||||| ||||| || || ||| |
Sbjct 238817 AGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGTTCGTGGCCGACCGCC 238876
Query 50611 TGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATG 50669
|| | ||| || || |||| ||| | ||| || || ||||| || || |||
Sbjct 238877 TGCTTTTGGCACTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATG 238935
Query 50670 AATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATACAAA 50729
| ||||| || ||| ||||| || ||||| ||||| | ||||| ||||| ||| ||
Sbjct 238936 GAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAA 238995
Query 50730 A 50730
|
Sbjct 238996 A 238996
>seq25
Length=313491
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241
||||| || || | ||||| || || || | ||||| || || || |||||||| ||
Sbjct 101233 TGGCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCT 101292
Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301
| ||| | || ||||| || |||||||| |||| ||||| ||||| || ||
Sbjct 101293 GAAAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGT 101352
Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361
|| ||||| || || || ||| || || | | || | ||||||| | |||
Sbjct 101353 GGGATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCC 101412
Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || | || | ||||||||||| | ||| || || |||||||||||
Sbjct 101413 ACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| ||||| || || |||||||| ||||| | |||| || || || || || ||
Sbjct 101494 GTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 101553
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
|| ||||||| || ||||| ||||| || ||||| || ||||| ||| || ||
Sbjct 101554 GCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 101613
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | |||||| | | || || || | || | |||||||||||||| ||
Sbjct 101614 ACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 101673
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| || ||||||
Sbjct 101674 TTGACGAAGATCTGCATA 101691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488541001561200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |