Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8 226 3e-54 seq25 140 3e-28 seq31 127 2e-24 seq64 87.8 2e-12 >seq8 Length=557162 Score = 226 bits (250), Expect = 3e-54 Identities = 1118/1745 (64%), Gaps = 51/1745 (3%) Strand=Plus/Plus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCT 148119 ||| || ||||| || ||||||||||| ||||| | | || || | | || |||| Sbjct 458998 CTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGATGTTACGCTGGCTG-ATCT 459056 Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179 ||||| | |||||||| || ||||| | ||| || ||| | |||||||| | | Sbjct 459057 CCCAGACGGTCTTGTAAAGTGCCTTGAGGTCATCTGGGATGTTGGGAATGCGCTGGATGG 459116 Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 | ||| | |||| || | || ||| | || | | || | |||| | Sbjct 459117 AACCGTTATCGGCAATGATGCGGTTCTTCATGTTCTCAGACCACAGACCACGGTCGACAA 459176 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGAT 148299 | || | | ||| | | || || ||||| ||||||||||| | || || || | Sbjct 459177 GATCCTTCAGCAGCCATGGGTTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAGT 459236 Query 148300 ACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTG 148359 | | ||||||||| | || || || |||| ||| ||||| ||||| | ||||| || Sbjct 459237 AGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGATG 459296 Query 148360 CCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCT 148419 | || ||||| || || |||||||||||||||| ||| | | || ||| || Sbjct 459297 CGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCCT 459356 Query 148420 TCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAA 148479 | || | ||||||||||| || | || ||| | ||||||||||||||| || Sbjct 459357 TGAGCTCGGCCCAGTCCCACAGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGAAGCT 459416 Query 148480 TGCCGCG-GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGT 148538 ||| | | || | || ||||| ||| | ||| || || || | | || || Sbjct 459417 CGCCTTGCGATA-CTGGAGAGCCCTGGTAAGTCTCGTATGGACCAAGCTTCTCGGCAAGC 459475 Query 148539 TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598 ||||| ||||| || ||| | | ||| || |||||| || || |||||||| | Sbjct 459476 TCGCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGCTCC 459535 Query 148599 ---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCC 148655 ||| | | | | ||| | |||||||| || || || || || ||||| || Sbjct 459536 TTGGCCTCGGGCGAG---TCGAATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGACCG 459592 Query 148656 TGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGG 148714 | || |||| ||||| || ||||| | |||| || || |||| | | || Sbjct 459593 TTGACACCCAGACCAATAGGTCGGTGACGGAAGTTGCTCTTCCGTGC-CTCTGGTACTGG 459651 Query 148715 ATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAATTCTGC 148773 || | |||| |||||| ||||| ||||| ||||| || ||||| || | | Sbjct 459652 GTAATAGTTGATCTCGATGGTCTTGTTCAAG-TTGCGAGTGACAACCTTGGTGACCTCGT 459710 Query 148774 GCAGC------AATTCAAAA---TCGTACTTGTCATCTACG-ATGCATCGGTTCACGGCG 148823 | ||| || || ||| |||| | | || ||| ||| |||| || || Sbjct 459711 GAAGCTTCTTGAAGTCGAAAACCTCGTTTTCGATGTCAACGTATG--TCGG--CAGAGCA 459766 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 | ||||| | ||||| || || |||||| || || |||||| | ||| || | | Sbjct 459767 AGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAGTG 459826 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 |||| || | |||||| ||| | |||||| || |||||||||| |||| || Sbjct 459827 CACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCA 459886 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG-AT- 149001 ||||||||||| ||| | ||| |||||| || ||| | ||| | ||| | || Sbjct 459887 TCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTC----AAGAATTGCATA 459942 Query 149002 GCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAAGTAT 149058 ||| || ||| ||||| || || | || | ||| || ||| ||| | Sbjct 459943 CCAGATCTTCTGGGCGCGAACGGTCT-CACGACCCTTACCTTCTCTCTCATATCGCTCGT 460001 Query 149059 ACAGCCGCTCGAACGCCTCGCCGTAGCAATC-GTCGAGACCGGGGCACTTGTGCGGGCAC 149117 | ||| || |||| | || |||||| || | | || || ||||||| | |||||| Sbjct 460002 AGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAG-CCAGGGCACTCATTGGGGCAC 460060 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 || || | ||| ||||| | | ||||||| ||| || ||||| || | ||| || Sbjct 460061 ATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGG 460120 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 ||||| | ||| ||||| || | || || ||| ||| || |||| | Sbjct 460121 GCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATG 460180 Query 149238 ACGCTG-AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC-- 149294 | ||| || | || |||||||| ||||||| ||| | || | || || |||| Sbjct 460181 A-ACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTT 460239 Query 149295 -TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 ||||| ||||||||||||| ||| | ||||||| |||||| | ||| ||| ||| Sbjct 460240 GTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAG 460299 Query 149354 GCCACTGGCAGTGCCGTTAGT-AGAGCTA-ATGCGACTGCCGCGCGCTCGCACTTTGTGC 149411 || ||| |||||||| || | | | || || || || || | ||||| Sbjct 460300 ACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGA--ACCAGTAGCACGGATATTGTGA 460357 Query 149412 ACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGA 149470 || | | || || ||||| ||| ||| ||||| || || ||| ||| || Sbjct 460358 ACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTC-TTGAGGGTGTC 460416 Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGG 149530 ||||||||| ||||||||||| |||||||| | || ||||| || || || | Sbjct 460417 GTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGC 460476 Query 149531 AAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCAT 149590 | || || || ||| | || || || ||||| || || ||| | ||| Sbjct 460477 TTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAGTACTTCAGCGACAT 460536 Query 149591 CATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCG 149650 | ||| | ||| | | | || || || || || ||||| || | || || || Sbjct 460537 GTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACACG 460596 Query 149651 CATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTT 149710 ||| | ||| |||||||||| ||| || || ||| | ||| |||| | ||| Sbjct 460597 CATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGTCGATTCTGAGAAGGTATGATCG 460656 Query 149711 TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGC 149770 || || |||||| |||| ||||||| ||||| ||||||||| ||| | ||||||| | Sbjct 460657 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGA 460716 Query 149771 GTCGA 149775 || || Sbjct 460717 GTTGA 460721 >seq25 Length=313491 Score = 140 bits (154), Expect = 3e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516 |||| ||||| || ||||| || ||||| |||| | ||| | | | ||||| ||||| Sbjct 101488 TGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCA-TCCTCAAGCTG 101546 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | || || |||||||||||||| |||||||| |||||||| ||||| Sbjct 101547 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTT 101606 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | |||| |||||| | | ||| || |||| ||||| ||| |||||||| Sbjct 101607 CGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 101666 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| |||||||| Sbjct 101667 CAAGGTCTTGACGAAGATCTGCAT 101690 Score = 109 bits (120), Expect = 5e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| | ||| ||| | |||||||||||||||| Sbjct 101721 GGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCA-TCCTCGAGCTGCTTGC 101779 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||||||||| ||||| || || |||||||| |||||| || Sbjct 101780 CTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCT 101839 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | | |||| |||||| | | |||||| |||| ||||| || ||||| |||| Sbjct 101840 TTACATTGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTCTTGCCAGTCA 101896 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| || | || | | | |||||||| Sbjct 101257 AAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGTCCGGCCA-TCCTCGAG 101315 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | ||||| ||||||||||| || |||||||| ||||| || || Sbjct 101316 CTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAAT 101375 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||| | | ||||| |||| || | || ||||| Sbjct 101376 CTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATTGTCTTGCC 101435 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || || || |||||| Sbjct 101436 GGTAAGTGTCTTCACAAATATTTGCATG 101463 >seq31 Length=267444 Score = 127 bits (140), Expect = 2e-24 Identities = 357/540 (66%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| || || ||||| || ||||| || ||||| ||| || ||||| | ||| Sbjct 238992 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCAT 238933 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||| |||||| | ||||| || | ||| | ||| | | ||||| || Sbjct 238932 GAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAAAGCAGGCG 238873 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACGCCA 120532 ||| || || ||||| ||||| | ||||| ||| ||||||||||| || | | Sbjct 238872 GTCGGCCACGAACTCGATGTATTGTGACATGAGACCA-GCGTTCATGCCGAGAAGCTTGC 238814 Query 120533 CCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGA 120592 |||| || |||| ||||||| |||||| | || ||||| || ||| Sbjct 238813 ATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCAACGATGATGCTCT 238754 Query 120593 GCATAGTGTGGCCGGGCATCTTG--TGTTCGATGCGCGTTCGGTAGTACAGG---CACGC 120647 ||| | ||| | | |||| | ||||| | | || || || ||||| || || Sbjct 238753 GCACA-AGTGCCTG---ATCTGGCTTGTTC--TTCAAGTGCG--AGAACAGGAGACAGGC 238702 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| ||||||| ||||| || || || || |||||||| || || ||||| | Sbjct 238701 GAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGCCAGC 238642 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||| | |||| |||||||| ||| || |||||||| | || Sbjct 238641 CATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGATACC 238582 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| || ||| || || |||| || ||| || || | | ||| |||||| Sbjct 238581 CTCAACAGCGGCGAAAGCAACCAATCGGAGGGCGAATGTGGAATTTTTGTCCGAGATCCA 238522 Query 120828 CTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAG 120887 || ||||| || ||||| || || | |||||| || |||| ||||| | ||| Sbjct 238521 TCGCAACGCCCAGTCAGCCTTCTTACGGATGCACGGGATGTTATCGATGGCGTTGAACAG 238462 >seq64 Length=168546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || ||| | || | ||||||||||| || || ||||| |||||| Sbjct 20761 TCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTG 20702 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | |||||| | | ||| || |||| |||| | Sbjct 20701 TCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATG 20642 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| || || || |||||||| Sbjct 20641 GTCTTGCCAGTGAGGGTCTTTACGAA 20616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417833004840