Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8 165 8e-36 >seq8 Length=557162 Score = 165 bits (182), Expect = 8e-36 Identities = 975/1542 (63%), Gaps = 49/1542 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| |||| ||||| | | || | ||||| ||| | ||| Sbjct 459197 TTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGC 459256 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || ||||||| ||| | || || | || | |||||||||||| || || Sbjct 459257 TCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACA 459316 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTCCC 147070 | || || || |||| ||| | | | ||| ||| |||| | | | | |||||||| Sbjct 459317 AGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCCTTGA--GCTCGGCCCAGTCCC 459374 Query 147071 ACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCG----ACTGGCG 147126 ||| | || ||| | ||||||||||||||| ||| | ||| | ||||| | Sbjct 459375 ACAGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGAAGCTCGCCTTGCGATACTGGAG 459434 Query 147127 GGAC-TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTC 147185 | | || | |||| || | | | || || || | || || ||||| Sbjct 459435 AGCCCTGGTAAGTCTCGTA-TGGACCAAGCTTCTCG----GCAAGCTCGCACGAAGCCTC 459489 Query 147186 GAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCT 147245 || || ||| ||| ||||| ||| ||| || |||| || | | || || Sbjct 459490 AAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGA 459549 Query 147246 CTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGAT 147305 ||| | |||||||| || || || ||||| || | ||| | || ||| | || || Sbjct 459550 GTCGAATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAAT 459609 Query 147306 AGGTCGATGCTTTTCGTTGCTGCGCTTC-GCGC-TC-GCTATGGGATAGTGGTTGCGATC 147362 |||||| || |||||| |||| | || || | || || || | |||| || Sbjct 459610 AGGTCGGTGACGGAAGTTGCT---CTTCCGTGCCTCTGGTACTGGGTAATAGTTGATCTC 459666 Query 147363 AATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATC 147422 || ||||||| | ||| || ||||| || || | | || |||| ||| || Sbjct 459667 GATGGTCTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTC 459726 Query 147423 ATAAGTCCCGTCTTCGAC----ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGC 147478 || | ||| ||||| ||||| | | || || || | || |||| |||| Sbjct 459727 GAAAACCTCGTTTTCGATGTCAACGTATG--TCGG--CAGAGCAAGCGAGGCCAAGTTGC 459782 Query 147479 AGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATT 147538 |||| || ||| || | | ||||| || |||||| | ||||| ||| | || Sbjct 459783 AGACAGCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTT 459842 Query 147539 TTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGT 147598 | ||| || | || | ||| ||||| || || ||| || || ||| | || ||| Sbjct 459843 TGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGA 459902 Query 147599 ACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTCG 147656 | ||| ||| |||||| || | ||||| || | || ||| || ||| || || Sbjct 459903 AAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTG-CATAC-CAGATCTTCTGGGCGCG 459960 Query 147657 CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTC 147716 || || ||| || || | || || |||||||| | | || ||||| || Sbjct 459961 AACGGTCTCACGACCCTTACCTTCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATC 460020 Query 147717 GCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTC 147776 |||||| || | | ||| || |||| || || |||||||| | ||| || ||| Sbjct 460021 ACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTT 460080 Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGC 147836 | | ||||| ||| || ||||| || | ||| || ||||| | |||||||| || Sbjct 460081 CTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGC 460140 Query 147837 TTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG---CACG--CT-ATAGATGTC 147890 | ||||| ||| | | ||| | || || | || | ||| || Sbjct 460141 ACGGACTTCCTCCTTGCC------GTGGTTCTTACGGAGGTCCATGAACTGAAAGACATC 460194 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTC 147947 ||||||||| || |||| ||||| ||| | |||||| ||||| || |||||||| Sbjct 460195 GGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTC 460254 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 ||| | ||| | ||||||| |||| | || ||| ||| | || ||| | | ||||| Sbjct 460255 GACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTGGATGTGCC 460314 Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067 ||||||| | ||| | | || || || | | ||| || | | ||||| || Sbjct 460315 GTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAACATGCAGACCAATACC 460374 Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGT-GTAGATGCCGTCGATGC 148126 ||| ||| ||| || || ||| || | | | | || ||||||||||||||||| Sbjct 460375 GCCAGCGTTCTTGGAGATCATAGCACA-TGTCTTGAGGGTGTCGTAGATGCCGTCGATGC 460433 Query 148127 TGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCG 148186 |||| | || | | ||| ||| || || ||| || || | | | ||||| || Sbjct 460434 TGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCAGCGC 460493 Query 148187 AGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAA 148246 |||||| || || ||| || || || | || | ||| | || ||||||| Sbjct 460494 TGAAAAGCGTTGGCGACGCATGTGTGAAGTACTTCAGCGACATGTAGTTGTATGTCTCAA 460553 Query 148247 TAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTG 148306 | || | || || || || ||||| || || | ||| || ||||||| ||| ||||| | Sbjct 460554 TCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACACGCATGATCATCTGCTGCG 460613 Query 148307 GTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAAC 148366 ||| || || || | || ||| ||||||| ||| || || || ||| | | Sbjct 460614 GTCTCTCAGCGACCTTGCCGTCGATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGC 460673 Query 148367 CAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | ||||||| ||| | || || | ||||| | ||||||| Sbjct 460674 CGAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCG 460715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608274798760