Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq31 143 4e-28 seq85 114 2e-19 seq8 111 2e-18 >seq31 Length=267444 Score = 143 bits (158), Expect = 4e-28 Identities = 346/512 (68%), Gaps = 20/512 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||||||||| || || |||||||| |||||| | || | Sbjct 238149 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATC 238207 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | | ||| || | | || |||||||| |||||| Sbjct 238208 TGTCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCT 238267 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| ||||| || || ||||| || ||||||||| | || Sbjct 238268 CACACGTTCTCGC-TTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAG 238326 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | ||||| || | ||||||||||| | || || || ||||||||| Sbjct 238327 CGCTTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATG 238386 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| ||||| ||||| ||||| || ||||| || ||| || || Sbjct 238387 ATGGAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACATATATCAGCGAGCC- 238445 Query 1456072 GTCGAGAAG-GACCACCTCT-TTC-GCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 || || || || ||| ||| ||||||||| | | |||| | | || ||| Sbjct 238446 --AAAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAG 238503 Query 1456129 GCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 || ||||||||| || |||||| |||| | || ||| || ||| || Sbjct 238504 GCTGACTGGGCGTTGCGATGGATCTCGGACAAAAA----TTCCACA-TTCGCCCTCCGAT 238558 Query 1456186 TCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244 | || | || ||||| || ||||| ||||| || || || ||| ||||||||| | Sbjct 238559 TGGTTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCT 238618 Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 |||| |||||||| || |||||| | || ||| Sbjct 238619 GGCTGAAGAAGCGTGGTCTCATGGCTGGCCTT 238650 Score = 100 bits (110), Expect = 4e-15 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||||| ||||| || | || ||| | ||||| ||| || | ||||| | Sbjct 238759 ATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGATGCTCTGCCATGCAAG 238818 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||||| ||||||| || ||||| || || || |||||||||| Sbjct 238819 CTTCTCGGCATGAACGCTGGT-CTCATGTCACAATACATCGAGTTC-GTGGCCGACCGCC 238876 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| ||| |||||| | ||||| |||| | ||||||| ||| | ||| Sbjct 238877 TGCTTTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCATTCGACTTCATG 238935 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| || | |||||||||||||| |||||| || | |||||||||| Sbjct 238936 GAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAA 238995 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 238996 AAGGCGGGTGTCA 239008 >seq85 Length=115538 Score = 114 bits (126), Expect = 2e-19 Identities = 290/440 (66%), Gaps = 1/440 (0%) Strand=Plus/Minus Query 332896 CTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATT 332955 ||| || | |||||||| | | |||| ||||| || | ||||| || ||||| | Sbjct 67357 CTGAAGCGGCTCGATGATCTTATTCGACTGATTGCACGCGAAAGCAAAACGGGTCGTGCT 67298 Query 332956 GGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGC 333015 | | | ||||||||||| || || ||||| || || | ||| | | ||| || Sbjct 67297 GCTGTAGATTTCCATGGTCCGTCGTAGAGCCTGCTGTGCTCCGCTCGTCATACTGTCCGC 67238 Query 333016 CTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTG 333075 ||| || || || | ||||| || || || || || ||| ||||| ||| Sbjct 67237 CTCATCTAGAATCACAATCTTTTGCCGTCCAGCGGGGAGTGTGACCTTTTTCTGTGCGAA 67178 Query 333076 GTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAG 333135 | |||||| | || | ||||||||| | ||||||||||| || ||||| |||||||| Sbjct 67177 GCCTTTGATCCTGTTCCTCACGACGTCGATTCCGCGCTCGTCTGATGCGTTCAGTTCGAG 67118 Query 333136 CACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGT 333195 ||| ||||| | || | || | | || || || ||| || | ||||| Sbjct 67117 CACTGCCTCCTTATATGCTGGGCCGAGCAATTGTCGTGCGAGACACAGGACGGATGTGGT 67058 Query 333196 CTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAG 333255 |||||| |||||||| ||| | | || || ||||||||||||||| ||| | Sbjct 67057 CTTGCCTATGCCGGGCATACCGCTGATGATGACGTGGGGCATGTTGCCGTCTTTGGCGAT 66998 Query 333256 CGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCG 333315 |||||| | | || | |||||| || ||||||||||| | | ||||| Sbjct 66997 GATTTTGAGGCGCTCGATGGTTTCGGTGTTGCCAACTATGTCGTCGAGGAAGACGGGGCG 66938 Query 333316 GTACTTTTCGATCCATGGGA 333335 ||| || |||| || ||||| Sbjct 66937 GTATTTCTCGA-CCCTGGGA 66919 >seq8 Length=557162 Score = 111 bits (122), Expect = 2e-18 Identities = 198/289 (69%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 |||||||| | ||| ||||| ||| |||| ||||| || | || || || |||| Sbjct 460537 CATGTCGCTGAAGTACTTCACACATGCGTCGCCAACGCTTTTCAGCGCTGGAACACCGCA 460478 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 | ||| | || ||||| || | | |||||||| || ||||| |||||||| Sbjct 460477 AGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGACAGCATCGACGGCATCTA 460418 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 ||||| |||||| || || | ||||||||| || ||||| || ||| | | Sbjct 460417 CGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGGCGGTATTGGTCTGCATGT 460358 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||||| | || || | || |||| | | |||||||||||| |||||||| || Sbjct 460357 TCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAACGGCACATCCAACGGTCT 460298 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| || ||| | | || | ||| |||| || ||||||||||||||| Sbjct 460297 TGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGTCGACCAG 460249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177763842147542