Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq31 143 4e-28
seq85 114 2e-19
seq8 111 2e-18
>seq31
Length=267444
Score = 143 bits (158), Expect = 4e-28
Identities = 346/512 (68%), Gaps = 20/512 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| || || |||||||| |||||| | || |
Sbjct 238149 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATC 238207
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | | | ||| || | | || |||||||| ||||||
Sbjct 238208 TGTCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCT 238267
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||| ||||| ||| ||||| || || ||||| || ||||||||| | ||
Sbjct 238268 CACACGTTCTCGC-TTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAG 238326
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | ||||| || | ||||||||||| | || || || |||||||||
Sbjct 238327 CGCTTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATG 238386
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||||||||| ||||| ||||| ||||| || ||||| || ||| || ||
Sbjct 238387 ATGGAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACATATATCAGCGAGCC- 238445
Query 1456072 GTCGAGAAG-GACCACCTCT-TTC-GCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128
|| || || || ||| ||| ||||||||| | | |||| | | || |||
Sbjct 238446 --AAAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAG 238503
Query 1456129 GCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185
|| ||||||||| || |||||| |||| | || ||| || ||| ||
Sbjct 238504 GCTGACTGGGCGTTGCGATGGATCTCGGACAAAAA----TTCCACA-TTCGCCCTCCGAT 238558
Query 1456186 TCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244
| || | || ||||| || ||||| ||||| || || || ||| ||||||||| |
Sbjct 238559 TGGTTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCT 238618
Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276
|||| |||||||| || |||||| | || |||
Sbjct 238619 GGCTGAAGAAGCGTGGTCTCATGGCTGGCCTT 238650
Score = 100 bits (110), Expect = 4e-15
Identities = 177/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||||| ||||| || | || ||| | ||||| ||| || | ||||| |
Sbjct 238759 ATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGATGCTCTGCCATGCAAG 238818
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| ||||||||||||| ||||||| || ||||| || || || ||||||||||
Sbjct 238819 CTTCTCGGCATGAACGCTGGT-CTCATGTCACAATACATCGAGTTC-GTGGCCGACCGCC 238876
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| ||| |||||| | ||||| |||| | ||||||| ||| | |||
Sbjct 238877 TGCTTTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCATTCGACTTCATG 238935
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| ||||| || | |||||||||||||| |||||| || | ||||||||||
Sbjct 238936 GAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAA 238995
Query 1456762 AAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 238996 AAGGCGGGTGTCA 239008
>seq85
Length=115538
Score = 114 bits (126), Expect = 2e-19
Identities = 290/440 (66%), Gaps = 1/440 (0%)
Strand=Plus/Minus
Query 332896 CTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATT 332955
||| || | |||||||| | | |||| ||||| || | ||||| || ||||| |
Sbjct 67357 CTGAAGCGGCTCGATGATCTTATTCGACTGATTGCACGCGAAAGCAAAACGGGTCGTGCT 67298
Query 332956 GGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGC 333015
| | | ||||||||||| || || ||||| || || | ||| | | ||| ||
Sbjct 67297 GCTGTAGATTTCCATGGTCCGTCGTAGAGCCTGCTGTGCTCCGCTCGTCATACTGTCCGC 67238
Query 333016 CTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTG 333075
||| || || || | ||||| || || || || || ||| ||||| |||
Sbjct 67237 CTCATCTAGAATCACAATCTTTTGCCGTCCAGCGGGGAGTGTGACCTTTTTCTGTGCGAA 67178
Query 333076 GTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAG 333135
| |||||| | || | ||||||||| | ||||||||||| || ||||| ||||||||
Sbjct 67177 GCCTTTGATCCTGTTCCTCACGACGTCGATTCCGCGCTCGTCTGATGCGTTCAGTTCGAG 67118
Query 333136 CACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGT 333195
||| ||||| | || | || | | || || || ||| || | |||||
Sbjct 67117 CACTGCCTCCTTATATGCTGGGCCGAGCAATTGTCGTGCGAGACACAGGACGGATGTGGT 67058
Query 333196 CTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAG 333255
|||||| |||||||| ||| | | || || ||||||||||||||| ||| |
Sbjct 67057 CTTGCCTATGCCGGGCATACCGCTGATGATGACGTGGGGCATGTTGCCGTCTTTGGCGAT 66998
Query 333256 CGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCG 333315
|||||| | | || | |||||| || ||||||||||| | | |||||
Sbjct 66997 GATTTTGAGGCGCTCGATGGTTTCGGTGTTGCCAACTATGTCGTCGAGGAAGACGGGGCG 66938
Query 333316 GTACTTTTCGATCCATGGGA 333335
||| || |||| || |||||
Sbjct 66937 GTATTTCTCGA-CCCTGGGA 66919
>seq8
Length=557162
Score = 111 bits (122), Expect = 2e-18
Identities = 198/289 (69%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
|||||||| | ||| ||||| ||| |||| ||||| || | || || || ||||
Sbjct 460537 CATGTCGCTGAAGTACTTCACACATGCGTCGCCAACGCTTTTCAGCGCTGGAACACCGCA 460478
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
| ||| | || ||||| || | | |||||||| || ||||| ||||||||
Sbjct 460477 AGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGACAGCATCGACGGCATCTA 460418
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
||||| |||||| || || | ||||||||| || ||||| || ||| | |
Sbjct 460417 CGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGGCGGTATTGGTCTGCATGT 460358
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||||| | || || | || |||| | | |||||||||||| |||||||| ||
Sbjct 460357 TCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAACGGCACATCCAACGGTCT 460298
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||| || ||| | | || | ||| |||| || |||||||||||||||
Sbjct 460297 TGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGTCGACCAG 460249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177763842147542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |