Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq25 152 5e-32
seq8 134 1e-26
seq64 87.8 2e-12
>seq25
Length=313491
Score = 152 bits (168), Expect = 5e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| |||||||||||||||||||| || |||||||||||||
Sbjct 101464 CCACCACGGAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTG 101523
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || |||| |||||||| ||||| ||
Sbjct 101524 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGG 101583
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | ||||| ||||| || ||
Sbjct 101584 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACC 101643
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| || || || ||||| || |||||
Sbjct 101644 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Score = 120 bits (132), Expect = 3e-22
Identities = 173/244 (71%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 134470 CCTGCGCCGTTGCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTT 134529
|| ||||| || || || || | || |||||||| | ||| || || || ||||| |
Sbjct 101219 CCCGCGCCATTTACTGGCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCT 101278
Query 134530 GAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAAC 134589
| ||||||||||| || || | || |||||||| || || || || || | ||
Sbjct 101279 GGATGTTGTAGTCTGAAAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGAC 101338
Query 134590 GCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG 134649
||||||| || || || ||||| || || |||||||| || || || ||| | |
Sbjct 101339 GCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAG 101398
Query 134650 TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTT 134709
|||| || |||||||| ||||| ||||| || || ||||| | || || || || ||||
Sbjct 101399 TGTCTGAAGATTCCACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTT 101458
Query 134710 GCAT 134713
||||
Sbjct 101459 GCAT 101462
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||| ||||| |||||||||||||||| | |||| || || |||
Sbjct 101710 ACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCCTCG 101769
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| |||||||| || ||||| |||||||| || || || || || || || || ||
Sbjct 101770 AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGG 101829
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||| || || ||||| ||||| || || || ||
Sbjct 101830 ATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTCTTG 101889
Query 134685 CCGGT 134689
|| ||
Sbjct 101890 CCAGT 101894
>seq8
Length=557162
Score = 134 bits (148), Expect = 1e-26
Identities = 304/450 (68%), Gaps = 9/450 (2%)
Strand=Plus/Minus
Query 7536 AATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCAT 7595
|||| ||||| | ||| || || || || ||| | |||| |||||||| || ||
Sbjct 460639 AATCGACGGCAAGGTCGCTGAGAGACCGCAGCAGATGATCATGCGTGTGGCGGTCGGTAT 460580
Query 7596 TCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTT 7655
||||| ||||| ||||| || || | || || ||| | ||||| |||| | ||
Sbjct 460579 CCACGGAGAAGATATTGAGGCTGCGATTGAGACATACAACTACATGTCGCTGAAGTACTT 460520
Query 7656 TACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC--GCCTCAATTGTCCTCG 7713
|| || || ||||| || | || ||| || ||| ||| ||| || ||| | ||
Sbjct 460519 CACACATGCGTCGCCAACGCTTTTCAGCGCTGGAACAC-CGCAAGCC-CAGTTGGCTTCC 460462
Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA- 7772
|| || ||| | ||||| || ||||||||||||||||| ||| |||| || | ||
Sbjct 460461 TGCTTCTTGATTGCCATGAAGGATGACAGCATCGACGGCATCTACGACACCCT-CAAGAC 460403
Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832
|| || | || ||||| ||| ||||| || |||||| | || || | | || ||
Sbjct 460402 ATGTGCTATGATCTCCAAGAACGCTGGCGGTATTGGTCTGCATGTTCACAATATCCGTGC 460343
Query 7833 CAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCG 7892
| ||| | |||| ||||||||| | | ||| |||| | | || |||||| |
Sbjct 460342 TACTGGTTCCTATATCGGTGGCACCAACGGCACATCCAACGGTCTTGTACCGATGTTGAG 460283
Query 7893 CGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGC 7949
|||| ||| ||| | | || | || |||||||| || |||||| ||| |||
Sbjct 460282 AGTGTACAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTT 460223
Query 7950 TGCCATCTATTTGGAGCCGTGGCACGCGGA 7979
||||||||| | ||||| |||||||| ||
Sbjct 460222 TGCCATCTACCTTGAGCCATGGCACGCCGA 460193
>seq64
Length=168546
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAA 134581
|||| |||||||||||||| | || | ||| | || || ||||| || || || ||
Sbjct 20796 CCTTCTGAATGTTGTAGTC--CGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAA 20739
Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641
|||||||||||||| || || || ||||| || || ||||| || || |||||
Sbjct 20738 GATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATT 20679
Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701
||| | |||||| || || || ||||| || ||||| || || || | || || ||
Sbjct 20678 GTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTAC 20619
Query 134702 GAAAATTTGCATTTTGTTTTTGTT 134725
||| | ||| | ||| || |||
Sbjct 20618 GAAGCTGTGCGATATGTGTTAGTT 20595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395298117320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |