Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq25 152 5e-32 seq8 134 1e-26 seq64 87.8 2e-12 >seq25 Length=313491 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| |||||||||||||||||||| || ||||||||||||| Sbjct 101464 CCACCACGGAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTG 101523 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || |||| |||||||| ||||| || Sbjct 101524 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGG 101583 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | ||||| ||||| || || Sbjct 101584 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACC 101643 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| || || || ||||| || ||||| Sbjct 101644 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690 Score = 120 bits (132), Expect = 3e-22 Identities = 173/244 (71%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 134470 CCTGCGCCGTTGCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTT 134529 || ||||| || || || || | || |||||||| | ||| || || || ||||| | Sbjct 101219 CCCGCGCCATTTACTGGCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCT 101278 Query 134530 GAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAAC 134589 | ||||||||||| || || | || |||||||| || || || || || | || Sbjct 101279 GGATGTTGTAGTCTGAAAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGAC 101338 Query 134590 GCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG 134649 ||||||| || || || ||||| || || |||||||| || || || ||| | | Sbjct 101339 GCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAG 101398 Query 134650 TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTT 134709 |||| || |||||||| ||||| ||||| || || ||||| | || || || || |||| Sbjct 101399 TGTCTGAAGATTCCACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTT 101458 Query 134710 GCAT 134713 |||| Sbjct 101459 GCAT 101462 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| |||||||||||||||| | |||| || || ||| Sbjct 101710 ACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCCTCG 101769 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| |||||||| || ||||| |||||||| || || || || || || || || || Sbjct 101770 AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGG 101829 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || ||||| ||||| || || || || Sbjct 101830 ATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTCTTG 101889 Query 134685 CCGGT 134689 || || Sbjct 101890 CCAGT 101894 >seq8 Length=557162 Score = 134 bits (148), Expect = 1e-26 Identities = 304/450 (68%), Gaps = 9/450 (2%) Strand=Plus/Minus Query 7536 AATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCAT 7595 |||| ||||| | ||| || || || || ||| | |||| |||||||| || || Sbjct 460639 AATCGACGGCAAGGTCGCTGAGAGACCGCAGCAGATGATCATGCGTGTGGCGGTCGGTAT 460580 Query 7596 TCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTT 7655 ||||| ||||| ||||| || || | || || ||| | ||||| |||| | || Sbjct 460579 CCACGGAGAAGATATTGAGGCTGCGATTGAGACATACAACTACATGTCGCTGAAGTACTT 460520 Query 7656 TACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC--GCCTCAATTGTCCTCG 7713 || || || ||||| || | || ||| || ||| ||| ||| || ||| | || Sbjct 460519 CACACATGCGTCGCCAACGCTTTTCAGCGCTGGAACAC-CGCAAGCC-CAGTTGGCTTCC 460462 Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA- 7772 || || ||| | ||||| || ||||||||||||||||| ||| |||| || | || Sbjct 460461 TGCTTCTTGATTGCCATGAAGGATGACAGCATCGACGGCATCTACGACACCCT-CAAGAC 460403 Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832 || || | || ||||| ||| ||||| || |||||| | || || | | || || Sbjct 460402 ATGTGCTATGATCTCCAAGAACGCTGGCGGTATTGGTCTGCATGTTCACAATATCCGTGC 460343 Query 7833 CAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCG 7892 | ||| | |||| ||||||||| | | ||| |||| | | || |||||| | Sbjct 460342 TACTGGTTCCTATATCGGTGGCACCAACGGCACATCCAACGGTCTTGTACCGATGTTGAG 460283 Query 7893 CGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGC 7949 |||| ||| ||| | | || | || |||||||| || |||||| ||| ||| Sbjct 460282 AGTGTACAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTT 460223 Query 7950 TGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 ||||||||| | ||||| |||||||| || Sbjct 460222 TGCCATCTACCTTGAGCCATGGCACGCCGA 460193 >seq64 Length=168546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAA 134581 |||| |||||||||||||| | || | ||| | || || ||||| || || || || Sbjct 20796 CCTTCTGAATGTTGTAGTC--CGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAA 20739 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 |||||||||||||| || || || ||||| || || ||||| || || ||||| Sbjct 20738 GATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATT 20679 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 ||| | |||||| || || || ||||| || ||||| || || || | || || || Sbjct 20678 GTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTAC 20619 Query 134702 GAAAATTTGCATTTTGTTTTTGTT 134725 ||| | ||| | ||| || ||| Sbjct 20618 GAAGCTGTGCGATATGTGTTAGTT 20595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395298117320