Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq31 109 8e-19
>seq31
Length=267444
Score = 109 bits (120), Expect = 8e-19
Identities = 552/868 (64%), Gaps = 20/868 (2%)
Strand=Plus/Minus
Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372
||| || ||| |||||||| || ||||| || |||||||| || || || ||||| |
Sbjct 239010 CATGACACCCGCCTTTTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 238951
Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432
|| ||| || || |||||||| || || || || || || || || || || ||
Sbjct 238950 CAGTGAGATGTTCTCCATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCC 238891
Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATT 39492
| | | ||| || | || || || || || |||||| | ||| | || ||
Sbjct 238890 GAGTGCCAAAAGCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTT 238831
Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGC 39552
||| || | || || ||| ||||| || || || ||||| | || || | || ||
Sbjct 238830 CATGCCGAGAAGCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGC 238771
Query 39553 CTCTGTTATTAT-CGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAA 39609
||| || || | || | | ||| ||| | | | | | | || || ||
Sbjct 238770 CTCAACGATGATGCTCTGCACAAGTGCCTGATC--TGGCTTGTT-CTTCAAGTGCGAGAA 238714
Query 39610 CATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAA 39669
|| | ||||||||||| || | |||||||| | || | ||||| || ||
Sbjct 238713 CAGGAGACAGGCGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAA 238654
Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729
||| || |||| ||| ||||||||||| || ||||| || ||||| || || || || ||
Sbjct 238653 TGTAAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGA 238594
Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT 39789
||||||||| || || || || || || ||||| | || || | | | || ||
Sbjct 238593 AAAGAAGATACCCTCAACAGCGGCGAAAGCAACCAATCGGAGGGCGAATGTGGAAT--TT 238536
Query 39790 ATGT-----ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844
||| ||||| | ||||| ||||| ||||| | || || || | ||
Sbjct 238535 TTGTCCGAGATCCATCGCAACGCCCAGTCAGCCTTCTTACGGATGCACGGGATGTTATCG 238476
Query 39845 ATAGCATTAAAGAGATAATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903
|| || || || |||| ||||| | | || | | |||||| || || | ||
Sbjct 238475 ATGGCGTTGAACAGAT-ATGTTCGCTGCTTTGGCTCGCTGATATATGTGTCAATAAGGAG 238417
Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963
|| |||| || |||||||| || ||| ||||| || || || || |||| |||
Sbjct 238416 GGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGTGC 238357
Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023
|| | || || ||||| || | || | || | | || || || || || || ||
Sbjct 238356 CTCTGGGATCTGAACCTCAGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTC 238297
Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT---TTTTCATC-GGGTGTCA 40079
|| || || || || | || ||| || || || | ||||| | |||
Sbjct 238296 TGATGCTGCGAAGAAAGCGAGAACGTGTGAGATGAAGAATCGCTCGTCATCATTGAGTC- 238238
Query 40080 ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACG 40139
|| ||||| || | | ||| || || | ||| | || || || ||||| ||||| |
Sbjct 238237 GCTTGTTCCAATCGTGCAGATCCTTGGACAGATCAATCTCCTCTGCGGTCCAGAACGATG 238178
Query 40140 CCTCTGCCTTTTTGTACATGTTCCATAT 40167
|||| ||||| |||||||| | ||| ||
Sbjct 238177 CCTCGGCCTTCTTGTACATCTGCCAGAT 238150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686904584097240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |