Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 230 3e-55 seq31 122 1e-22 >seq8 Length=557162 Score = 230 bits (254), Expect = 3e-55 Identities = 1128/1769 (64%), Gaps = 47/1769 (3%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| || ||| || | || | || || ||||||||||| || |||||||| | Sbjct 458859 TGAACTGGATAGGTGCCGACGCAGCTTGTGTACGAAGGTAGTACATGCCAGTCTTGAGAC 458918 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | ||||||| || | |||||| | | |||| | |||||| | |||| Sbjct 458919 CAAGCTTCCAACCAGCGAAATGCATGCTCGTGATCTTGCCCATGGTTGGCTCCTTCATGT 458978 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || |||| || || || |||||||||||| || || || || ||||| | | | Sbjct 458979 GGATATTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGA 459038 Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044 | | |||| ||||| || ||| |||| || ||| | ||||||||||| | Sbjct 459039 TGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGGTCATCTGGGATGT 459098 Query 118045 CCACGATATTTTGGATGGATCC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101 || |||||||| || | | || ||| || | | |||||| | || | Sbjct 459099 TGGGAATGCGCTGGATGGAACCGTTATCGGCAATGA---TGCGGTTCTTCATGTTCTCAG 459155 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTC 118159 |||| |||||| | ||||||| || || ||| | |||| || ||||| Sbjct 459156 ACCACAGACCACGGTCGACAAGATCCTTCAGCAGCCATGGGT--TGACGACCTGGAACTC 459213 Query 118160 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219 || || | | || | ||||| ||| ||||||||||||| |||||||||||| Sbjct 459214 GCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAA 459273 Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 |||| ||| || | || || || || ||||| ||||| | || || ||| || | Sbjct 459274 GCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCAC 459333 Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT----GTCT 118335 ||| | | || ||||||| || ||||||| | | || | |||| Sbjct 459334 ACCATGCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCACAGGT-CTGTAGGAGTCT 459392 Query 118336 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 118395 ||| ||||| || |||| || ||||| || |||| || |||| | |||| Sbjct 459393 TGCCC---CACATGTCGTACTGAAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTCT 459449 Query 118396 CATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTG 118455 | ||||| || ||| || | ||| | ||||| || || || || || || | Sbjct 459450 CGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGG 459509 Query 118456 TTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 118515 | || || || | || | ||||||||||| || || || | | ||| Sbjct 459510 TCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGGG 459569 Query 118516 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 118575 | || |||| || ||||| | |||||| || ||||| || || || | | || Sbjct 459570 CCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTTGC 459629 Query 118576 ACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 |||||| || ||| || || ||| | || | ||||| | | || | || Sbjct 459630 TCTTCCGTGCC-TCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGA 459688 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC-AAAACTGCGAGTCTCTTCATT 118693 ||||||||||| |||| || |||||||| | | | || ||||| || | ||| | Sbjct 459689 GTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCG----TTTTCGAT 459744 Query 118694 GACA---TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 | || || | || || || | || |||| || || |||| | |||||| | Sbjct 459745 GTCAACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGC 459804 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 || |||||| || ||||| ||||||||||| ||||| || |||||||| | |||||| || Sbjct 459805 AGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTG 459864 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| ||||||||||| || ||| | || || || ||||| || || Sbjct 459865 GTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTG 459924 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929 || | ||||| || | ||||| | || | || | || || | | || | Sbjct 459925 GGCTTCAAGAATTGCATACCAGATCTTCTG-GGCGCGAACGGTCTCACGACCCTTACCTT 459983 Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989 || ||| || |||||| | | ||||| ||||| | | || || | || | Sbjct 459984 CTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGCCAG 460043 Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049 | || || ||||| | || | ||| || || ||| || |||| |||||||| Sbjct 460044 GGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGA 460103 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109 | ||||||||||| || || |||||||||| ||| || |||| || | || || | Sbjct 460104 GATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGT 460163 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | ||| | |||| || | | || ||| |||||||| || || ||||| | || | Sbjct 460164 TCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGC-A 460222 Query 119170 TTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATA 119223 | | ||| | || ||| |||||| || || | |||||| ||| | | Sbjct 460223 AAGGCACCT--GGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACA 460280 Query 119224 CACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTT 119281 | | | ||| || | | ||| | |||| ||| || || || |||| ||| || || Sbjct 460281 CTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGA-AC-C 460338 Query 119282 ATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 119341 | | || | || || ||| | |||| ||||||||| || || ||| ||||| || Sbjct 460339 AGTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGC 460398 Query 119342 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 119401 || | |||| || ||||||| || ||||| |||| |||| | || || | ||| Sbjct 460399 ACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAA 460458 Query 119402 GCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460 |||| | || || ||| || ||||| |||||| |||| || ||||| | ||| || Sbjct 460459 GCAGGAAGCCAACTG-GGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTG 460517 Query 119461 TGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCG 119519 |||| ||| | | ||||| | || ||| ||||| | | || ||| ||||| ||| Sbjct 460518 TGAA-GTACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCG 460576 Query 119520 TGAATACCGATCGAGACCCGCATAAACAT 119548 || ||||||| || || ||||| | ||| Sbjct 460577 TGGATACCGACCGCCACACGCATGATCAT 460605 >seq31 Length=267444 Score = 122 bits (134), Expect = 1e-22 Identities = 298/446 (67%), Gaps = 32/446 (7%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| ||| ||| ||| |||||||| Sbjct 238991 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCATG 238932 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACT-CCAATCTGTTTGAG 129840 || || |||||||| | | ||| | | ||| || | | | |||| || Sbjct 238931 AAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAA-------AG 238879 Query 129841 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG 129900 || || || | ||| |||| ||||| | ||||| | | |||||| |||| || Sbjct 238878 CAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAAG 238819 Query 129901 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGAT 129960 || ||||| || || || || |||| ||| |||||| | || || || ||||| Sbjct 238818 CTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCA---ACGAT 238762 Query 129961 GGCGTGAATGGTCTCC----GTGCCAGGTCTA--TTGCGCA--AAGT-CTTGAAGAGTTC 130011 | ||| ||| | ||||| | ||| ||| | |||| | ||| || Sbjct 238761 G------ATGCTCTGCACAAGTGCCTGATCTGGCTTGTTCTTCAAGTGCGAGAACAGGAG 238708 Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 ||| || || ||| | |||||| ||||||||||| || || |||||||| || Sbjct 238707 ACAGGCGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAG 238648 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 || | ||||||||| |||||||||| |||||| || || || || || || ||||| Sbjct 238647 GCCAGCCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAA 238588 Query 130132 GATCCCCTCCACACACGCGAACGCAA 130157 ||| ||||| ||| ||||| |||| Sbjct 238587 GATACCCTCAACAGCGGCGAAAGCAA 238562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431404353960