Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 253 2e-62 seq31 111 2e-19 >seq8 Length=557162 Score = 253 bits (280), Expect = 2e-62 Identities = 904/1395 (65%), Gaps = 35/1395 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| ||||||| ||||| ||||||| || || ||||| ||||| ||| Sbjct 460614 CCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGCTGCG 460555 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| || | ||||| | | ||| |||| || || | ||||| || || Sbjct 460554 ATTGAGACATACAACTACATGTCGCTGAAGTAC-TTCACACATGCGTCGCCAACGCTTTT 460496 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || ||||| ||||| | |||| || | |||||| | || |||| ||||| || Sbjct 460495 CAGCGCTGGAACACCGCAAGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGA 460436 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| |||| ||||| | || || | | ||||| ||||| ||| ||||| Sbjct 460435 CAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGG 460376 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| |||| | || || | | || | | || ||| | || || || Sbjct 460375 CGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAA 460316 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || ||| | ||| || | || ||| | | || | ||| ||| || ||||| || Sbjct 460315 CGGCACATCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGT 460256 Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 | || | ||| ||| | | || | | || |||| |||||||||||||| Sbjct 460255 CGACCAGGGTGGCAACAAGCGCCCA---GGTGCCTTTGCCATCTACCTTGAGCCATGGCA 460199 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| ||| || | ||||| | || | ||| ||||| || | ||||| | || || Sbjct 460198 CGCCGATGTCTTTCAGTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAAGTCCG-TG 460140 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | ||||||||||||| ||| || ||||| ||||||||||||||| || | || ||| ||| Sbjct 460139 CTCGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTCGAGCAGA 460080 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 |||| |||| | || | || || | || ||||| | || || | | |||| Sbjct 460079 ACGGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGTCTACGGTG 460020 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | ||||| | | || ||| || ||| ||||||| || || ||| || | Sbjct 460019 ATGAGTTCAAGGAGCTCTACGAGCGATATGAGAGAGAAGGTAAGGGTCGTGAGACCGTTC 459960 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 || | || | | ||| | || ||||| | | || ||||||||||| ||||| | | Sbjct 459959 GCGC-CCAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGCACACCTTTC 459901 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 || || ||||| || ||| |||| ||||| || || ||||| | || ||||| Sbjct 459900 ATCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCAAA 459841 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 ||||| || | || || |||||| |||| | | | ||||||| ||||| || Sbjct 459840 AGTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATGAGGTCGCTGTCTGC 459781 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GATT 105110 ||| | || || | ||||| || | || || || || || || || ||| || | Sbjct 459780 AACTTGGCCTCGCTTGCTCTGCCGACATACGTTGA--CATCGAAAACGAGGTTTTCGACT 459723 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | || || ||||| || || || |||||| ||| | |||| || || | Sbjct 459722 TCAAGAAGCTTCACGAGGTCACCAAGGTTGTCACTCGCAACTTGAACAAGACCATCGAGA 459663 Query 105171 GAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || | |||||| || ||| || || || || | | ||||| || |||||| Sbjct 459662 TCAACTATTACCCAGTACCAGA-GGCACGGAAGAGCAACTTCCGTCACCGACCTATTGGT 459604 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACG-CATTTGATTC 105285 || ||||| | ||||| || |||| | ||||| | || | | |||| || || Sbjct 459603 CTGGGTGTCAACGGTCTTGCTGATG----CTTTCTTGGCCCTCCGTATGCCATTCGACTC 459548 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 ||| || ||||| |||| | || || |||||||| || || ||||||||||| Sbjct 459547 GCCCGAGGCCAAGGAGCTCAACATCCATATCTTCGAGACCATCTACCATGCCGCTCTTGA 459488 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 ||| | ||| | || ||| ||||||||| || || | |||| ||||||| Sbjct 459487 GGCTTCGTGCGAGCTTGCCGAGAAGCTTGGTCCATACGAGACTTACCAGGGCTCTCCAGT 459428 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGA 105462 || ||||| | |||||| | || ||||||| ||| | || | || | || Sbjct 459427 ATCGCAAGGCGAGCTTCAGTACGACATGTGGGGCAAGACTCCTACAGACCT---GTGGGA 459371 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 ||||| | ||||||| ||| || | ||| | || ||| || || | || Sbjct 459370 CTGGGCCGAGCTCAAGGCCAAGATCGCTCAGCATGGTGTGCGCAACTCGCTGCTTGTTGC 459311 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 || ||||| || || || ||| |||| ||| |||| ||||| ||||| || || || Sbjct 459310 ACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTCAATGAGTGCTTCGAGCCATA 459251 Query 105583 CACGACGAACATCTA 105597 ||||| |||||||| Sbjct 459250 CACGAGCAACATCTA 459236 >seq31 Length=267444 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886 |||||||||||||||||| || ||||||||| ||| || | ||||| |||||||| || Sbjct 238575 TGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGG 238634 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946 ||||||| | || || ||||| |||||||||||||| ||||| ||||| | ||| Sbjct 238635 TCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTATGCACAC 238694 Query 94947 AGAGTTTGC 94955 ||| || || Sbjct 238695 AGACTTCGC 238703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257220236840