Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq8 253 2e-62
seq31 111 2e-19
>seq8
Length=557162
Score = 253 bits (280), Expect = 2e-62
Identities = 904/1395 (65%), Gaps = 35/1395 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||| ||||||| ||||| ||||||| || || ||||| ||||| |||
Sbjct 460614 CCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGCTGCG 460555
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||||||| || | ||||| | | ||| |||| || || | ||||| || ||
Sbjct 460554 ATTGAGACATACAACTACATGTCGCTGAAGTAC-TTCACACATGCGTCGCCAACGCTTTT 460496
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|| ||||| ||||| | |||| || | |||||| | || |||| ||||| ||
Sbjct 460495 CAGCGCTGGAACACCGCAAGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGA 460436
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| ||| |||| ||||| | || || | | ||||| ||||| ||| |||||
Sbjct 460435 CAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGG 460376
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| |||| | || || | | || | | || ||| | || || ||
Sbjct 460375 CGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAA 460316
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| ||| | ||| || | || ||| | | || | ||| ||| || ||||| ||
Sbjct 460315 CGGCACATCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGT 460256
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| || | ||| ||| | | || | | || |||| ||||||||||||||
Sbjct 460255 CGACCAGGGTGGCAACAAGCGCCCA---GGTGCCTTTGCCATCTACCTTGAGCCATGGCA 460199
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
||| ||| || | ||||| | || | ||| ||||| || | ||||| | || ||
Sbjct 460198 CGCCGATGTCTTTCAGTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAAGTCCG-TG 460140
Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
| ||||||||||||| ||| || ||||| ||||||||||||||| || | || ||| |||
Sbjct 460139 CTCGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTCGAGCAGA 460080
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
|||| |||| | || | || || | || ||||| | || || | | ||||
Sbjct 460079 ACGGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGTCTACGGTG 460020
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873
| ||||| | | || ||| || ||| ||||||| || || ||| || |
Sbjct 460019 ATGAGTTCAAGGAGCTCTACGAGCGATATGAGAGAGAAGGTAAGGGTCGTGAGACCGTTC 459960
Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932
|| | || | | ||| | || ||||| | | || ||||||||||| ||||| | |
Sbjct 459959 GCGC-CCAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGCACACCTTTC 459901
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992
|| || ||||| || ||| |||| ||||| || || ||||| | || |||||
Sbjct 459900 ATCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCAAA 459841
Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052
||||| || | || || |||||| |||| | | | ||||||| ||||| ||
Sbjct 459840 AGTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATGAGGTCGCTGTCTGC 459781
Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GATT 105110
||| | || || | ||||| || | || || || || || || || ||| || |
Sbjct 459780 AACTTGGCCTCGCTTGCTCTGCCGACATACGTTGA--CATCGAAAACGAGGTTTTCGACT 459723
Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170
| || || ||||| || || || |||||| ||| | |||| || || |
Sbjct 459722 TCAAGAAGCTTCACGAGGTCACCAAGGTTGTCACTCGCAACTTGAACAAGACCATCGAGA 459663
Query 105171 GAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229
|| | |||||| || ||| || || || || | | ||||| || ||||||
Sbjct 459662 TCAACTATTACCCAGTACCAGA-GGCACGGAAGAGCAACTTCCGTCACCGACCTATTGGT 459604
Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACG-CATTTGATTC 105285
|| ||||| | ||||| || |||| | ||||| | || | | |||| || ||
Sbjct 459603 CTGGGTGTCAACGGTCTTGCTGATG----CTTTCTTGGCCCTCCGTATGCCATTCGACTC 459548
Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345
||| || ||||| |||| | || || |||||||| || || |||||||||||
Sbjct 459547 GCCCGAGGCCAAGGAGCTCAACATCCATATCTTCGAGACCATCTACCATGCCGCTCTTGA 459488
Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405
||| | ||| | || ||| ||||||||| || || | |||| |||||||
Sbjct 459487 GGCTTCGTGCGAGCTTGCCGAGAAGCTTGGTCCATACGAGACTTACCAGGGCTCTCCAGT 459428
Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGA 105462
|| ||||| | |||||| | || ||||||| ||| | || | || | ||
Sbjct 459427 ATCGCAAGGCGAGCTTCAGTACGACATGTGGGGCAAGACTCCTACAGACCT---GTGGGA 459371
Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522
||||| | ||||||| ||| || | ||| | || ||| || || | ||
Sbjct 459370 CTGGGCCGAGCTCAAGGCCAAGATCGCTCAGCATGGTGTGCGCAACTCGCTGCTTGTTGC 459311
Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582
|| ||||| || || || ||| |||| ||| |||| ||||| ||||| || || ||
Sbjct 459310 ACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTCAATGAGTGCTTCGAGCCATA 459251
Query 105583 CACGACGAACATCTA 105597
||||| ||||||||
Sbjct 459250 CACGAGCAACATCTA 459236
>seq31
Length=267444
Score = 111 bits (122), Expect = 2e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886
|||||||||||||||||| || ||||||||| ||| || | ||||| |||||||| ||
Sbjct 238575 TGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGG 238634
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946
||||||| | || || ||||| |||||||||||||| ||||| ||||| | |||
Sbjct 238635 TCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTATGCACAC 238694
Query 94947 AGAGTTTGC 94955
||| || ||
Sbjct 238695 AGACTTCGC 238703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257220236840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |