Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq31 168 2e-36 seq57 136 1e-26 seq25 100 9e-16 >seq31 Length=267444 Score = 168 bits (186), Expect = 2e-36 Identities = 478/730 (65%), Gaps = 7/730 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || ||||| || || || || || | | | | | |||| || Sbjct 134893 GCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGACCGC 134952 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || || || |||||| | ||||| || || | ||| || || || Sbjct 134953 ATCGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTCGCCTTCACA 135012 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| ||||||||||| | || || || || | || || ||| ||| Sbjct 135013 GACACCGAGCGATTGATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCAGCAAAC 135072 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 || || || || || |||||| | || ||| | | ||| || || | |||| | Sbjct 135073 ACCGTCTTCGACGCAAAGCGATTAATCGGTCGCAAGTTTCAAGATGCAGAGGTACA--AG 135130 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | ||| | || || || || || | || | | | ||| | || ||| ||| | || Sbjct 135131 CAGATATGAAGCACTTCCCCTTCAAGGTCAT-CGAGAAGGC--TGGTAAGCCAGTCATCT 135187 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 ||| || | || || || | || ||||| ||| || || || || | ||| | Sbjct 135188 CGGTCGAGTTCAAGGGGGAGGAGAAGCAATTCACACCAGAGGAGATCTCCGCCATGATCC 135247 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || ||| || | || || | || | |||| ||| || | | || ||| Sbjct 135248 TCACCAAGATGCGTGAGACCGCAGAGTCTTACCTCGGTGGAACCGTGAACAACGCCGTTG 135307 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || ||||| || || || || ||||| | ||||| || |||||||| || Sbjct 135308 TCACAGTTCCAGCTTACTTCAACGACTCCCAGAGACAAGCAACCAAGGATGCTGGTCTCA 135367 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | || || || | || || || || || ||||| || || ||||| |||| Sbjct 135368 TCGCTGGCCTTAACGTCCTCCGTATCATCAACGAGCCAACTGCAGCTGCCATTGCCTATG 135427 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | || || || | || ||| || || | || || || || || |||||||||| Sbjct 135428 GTCTGGACAAGAAGACTGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGGGTGGTGGTA 135487 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| ||||| || ||| |||| ||||| || || || || || | ||||| | Sbjct 135488 CCTTCGATGTGTCACTGCTCACAATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCG 135547 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || ||||| |||||| || |||||||| | Sbjct 135548 GTGACACTCACTTGGGTGGTGAGGACTTCGACAATCGCCTCGTTAACCACTTTGTTAACG 135607 Query 349917 AATTTAAGCG 349926 |||| || || Sbjct 135608 AATTCAAACG 135617 >seq57 Length=191715 Score = 136 bits (150), Expect = 1e-26 Identities = 252/369 (68%), Gaps = 3/369 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || |||||| | ||||| ||| | | | || ||||||||| | || || | ||| | Sbjct 20469 CCAGAAGAAGTCTCATCCATGATCCTGGGCAAGATGAAGGAAGTCGCCGAGTCCTATCTC 20410 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 ||||| | || || | || ||| ||||||| |||||||| || || || ||||||||| Sbjct 20409 GGTGAGAAGGTTACCAACGCAGTTGTTACTGTCCCAGCCTACTTCAACGACGCCCAGCGT 20350 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 | || || || || ||||||| || || || | || ||||| | | | || ||| Sbjct 20349 GCCGCCACCAAGGACGCTGGCACGATCGCCGGTCTCAACGTTCTCCGTGTCGTCAACGAA 20290 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || | || || || || || || || ||| | ||| | || Sbjct 20289 CCCACCGCGGCCGCTCTCGCCTACGGACTCGACAA---GACCGACAAGGAACGCCAGATC 20233 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 | | | ||| | ||||||||||| || ||||| || | | || | || |||| Sbjct 20232 ATCGTGTACGATCTCGGTGGTGGTACCTTCGATGTCTCCATTTTGACTGTCGACCAGGGC 20173 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 |||| || || | ||||||||||| || || ||||||||||| || ||||| || | Sbjct 20172 GTTTTCGAGGTGCAGGCAACTGCTGGAGACACCCATCTTGGTGGTGAGGATTTCGACCAG 20113 Query 349892 CGTCTCGTT 349900 ||| ||||| Sbjct 20112 CGTGTCGTT 20104 >seq25 Length=313491 Score = 100 bits (110), Expect = 9e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || ||| || ||||| || || || Sbjct 101688 CATACCACCACGCAGACGAAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTC 101747 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || ||||| || || || || || || ||||| | || ||||| || || Sbjct 101748 GCTGAGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGG 101807 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || || || ||||| || || ||| |||||||| ||||||| ||||| | | Sbjct 101808 AGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTTACATTGTCAATCGTGTCAGAAGACT 101866 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | || || || || | |||||| || || | ||| Sbjct 101867 CCACCTCGAGGGTGATTGTCTTGCCAGTCACTGT 101900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515244867629273