Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq31 168 2e-36
seq57 136 1e-26
seq25 100 9e-16
>seq31
Length=267444
Score = 168 bits (186), Expect = 2e-36
Identities = 478/730 (65%), Gaps = 7/730 (1%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || ||||| || ||||| || || || || || | | | | | |||| ||
Sbjct 134893 GCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGACCGC 134952
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| || || || || || || || |||||| | ||||| || || | ||| || || ||
Sbjct 134953 ATCGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTCGCCTTCACA 135012
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || ||||| ||||||||||| | || || || || | || || ||| |||
Sbjct 135013 GACACCGAGCGATTGATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCAGCAAAC 135072
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436
|| || || || || |||||| | || ||| | | ||| || || | |||| |
Sbjct 135073 ACCGTCTTCGACGCAAAGCGATTAATCGGTCGCAAGTTTCAAGATGCAGAGGTACA--AG 135130
Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496
| ||| | || || || || || | || | | | ||| | || ||| ||| | ||
Sbjct 135131 CAGATATGAAGCACTTCCCCTTCAAGGTCAT-CGAGAAGGC--TGGTAAGCCAGTCATCT 135187
Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556
||| || | || || || | || ||||| ||| || || || || | ||| |
Sbjct 135188 CGGTCGAGTTCAAGGGGGAGGAGAAGCAATTCACACCAGAGGAGATCTCCGCCATGATCC 135247
Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616
| || ||| || | || || | || | |||| ||| || | | || |||
Sbjct 135248 TCACCAAGATGCGTGAGACCGCAGAGTCTTACCTCGGTGGAACCGTGAACAACGCCGTTG 135307
Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676
| || || ||||| || || || || ||||| | ||||| || |||||||| ||
Sbjct 135308 TCACAGTTCCAGCTTACTTCAACGACTCCCAGAGACAAGCAACCAAGGATGCTGGTCTCA 135367
Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736
| || || | || || || | || || || || || ||||| || || ||||| ||||
Sbjct 135368 TCGCTGGCCTTAACGTCCTCCGTATCATCAACGAGCCAACTGCAGCTGCCATTGCCTATG 135427
Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796
| || || || | || ||| || || | || || || || || ||||||||||
Sbjct 135428 GTCTGGACAAGAAGACTGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGGGTGGTGGTA 135487
Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856
| || ||||| ||||| || ||| |||| ||||| || || || || || | ||||| |
Sbjct 135488 CCTTCGATGTGTCACTGCTCACAATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCG 135547
Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916
|||| || || | ||||| || || || || ||||| |||||| || |||||||| |
Sbjct 135548 GTGACACTCACTTGGGTGGTGAGGACTTCGACAATCGCCTCGTTAACCACTTTGTTAACG 135607
Query 349917 AATTTAAGCG 349926
|||| || ||
Sbjct 135608 AATTCAAACG 135617
>seq57
Length=191715
Score = 136 bits (150), Expect = 1e-26
Identities = 252/369 (68%), Gaps = 3/369 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| |||||| | ||||| ||| | | | || ||||||||| | || || | ||| |
Sbjct 20469 CCAGAAGAAGTCTCATCCATGATCCTGGGCAAGATGAAGGAAGTCGCCGAGTCCTATCTC 20410
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
||||| | || || | || ||| ||||||| |||||||| || || || |||||||||
Sbjct 20409 GGTGAGAAGGTTACCAACGCAGTTGTTACTGTCCCAGCCTACTTCAACGACGCCCAGCGT 20350
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
| || || || || ||||||| || || || | || ||||| | | | || |||
Sbjct 20349 GCCGCCACCAAGGACGCTGGCACGATCGCCGGTCTCAACGTTCTCCGTGTCGTCAACGAA 20290
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
||||| || || || | || || || || || || || ||| | ||| | ||
Sbjct 20289 CCCACCGCGGCCGCTCTCGCCTACGGACTCGACAA---GACCGACAAGGAACGCCAGATC 20233
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
| | | ||| | ||||||||||| || ||||| || | | || | || ||||
Sbjct 20232 ATCGTGTACGATCTCGGTGGTGGTACCTTCGATGTCTCCATTTTGACTGTCGACCAGGGC 20173
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891
|||| || || | ||||||||||| || || ||||||||||| || ||||| || |
Sbjct 20172 GTTTTCGAGGTGCAGGCAACTGCTGGAGACACCCATCTTGGTGGTGAGGATTTCGACCAG 20113
Query 349892 CGTCTCGTT 349900
||| |||||
Sbjct 20112 CGTGTCGTT 20104
>seq25
Length=313491
Score = 100 bits (110), Expect = 9e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| || || || ||| || ||||| || || ||
Sbjct 101688 CATACCACCACGCAGACGAAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTC 101747
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || || ||||| || || || || || || ||||| | || ||||| || ||
Sbjct 101748 GCTGAGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGG 101807
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||| || || || ||||| || || ||| |||||||| ||||||| ||||| | |
Sbjct 101808 AGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTTACATTGTCAATCGTGTCAGAAGACT 101866
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
| || || || || | |||||| || || | |||
Sbjct 101867 CCACCTCGAGGGTGATTGTCTTGCCAGTCACTGT 101900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515244867629273
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |