Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq8 214 2e-50
seq31 123 3e-23
seq33 111 2e-19
>seq8
Length=557162
Score = 214 bits (236), Expect = 2e-50
Identities = 518/772 (67%), Gaps = 22/772 (3%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||||| || || | ||||||||||| || || | | || || |||||| |||
Sbjct 460601 TCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGC-TGCGATTGAGACATAC 460543
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
||| ||| | |||||||| || || || ||||||| || |||| |||||| ||
Sbjct 460542 AACTACATGTCGCTGAAGTACTTCACACATGCGTCGCCAACGCTTTTCAGCGCTGGAACA 460483
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
|| | ||| || | ||||||| || | || |||||||||||| |||||||||
Sbjct 460482 CCGCAAGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGACAGCATCGACGGC 460423
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || |||||| ||||| ||||||||| | || ||||| ||| |
Sbjct 460422 ATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGGCGGTATTGGTCTG 460363
Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| || || || ||||||| | || | ||| || || |||||| || |
Sbjct 460362 CA-TGTTCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAACGGCACATCCAA 460304
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| | || || ||| | | || | ||||||||| || || |||||| ||||||||||
Sbjct 460303 CGGTCTTGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGTCGACCAGGGTGG 460244
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
|||||| || | || ||||||||||| ||||| ||||||||||| | | |
Sbjct 460243 CAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCCGATGTCTTTCA 460184
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668
||| | || || ||| ||| || || | || || | || ||| || || || || |
Sbjct 460183 GTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAAGTCCG-TGCTCGCGATCTCTTCT 460125
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || || ||||| || || ||||||||| | || ||| || ||| ||| |
Sbjct 460124 AC-GCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTCGAGCAGAACGGCACTTGGACC 460066
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
||||||||||| || |||||||| ||| | | ||||||||||| ||||| || |||
Sbjct 460065 CTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGTCTACGGTGATGAGTTCAAGGAG 460006
Query 53789 ATGTATCGGACG-TA------CGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCG 53841
| || || || || | || | |||| || ||| || || |
Sbjct 460005 CTCTA-CGAGCGATATGAGAGAGAAGGTAAGGGTCG------TGAGACCGTTCGCGCCCA 459953
Query 53842 TGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTA 53901
|| | ||| ||||||| || | |||| ||||| || || || | ||| ||
Sbjct 459952 GAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGCACACCTTTCATCCTGTA 459893
Query 53902 CAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAA 53953
||||||| | | |||| |||||||||||||||||| | ||| |||||||
Sbjct 459892 CAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCAAA 459841
Score = 93.3 bits (102), Expect = 5e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| || || || ||||| ||||| ||||| | |||||||||||| |
Sbjct 459330 CGCAACTCGCTGCTTGTTGCACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTC 459271
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|| ||| |||||||| ||||||| ||||||||||
Sbjct 459270 AATGAGTGCTTCGAGCCATACACGAGCAACATCTAC 459235
>seq31
Length=267444
Score = 123 bits (136), Expect = 3e-23
Identities = 531/822 (65%), Gaps = 32/822 (4%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || || ||||| || || ||||||||||| || ||| ||||||||||||||
Sbjct 238991 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCATG 238932
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCC---ATGAGG 74579
||||||| ||||| | || ||| | ||| | || | ||||| | |||
Sbjct 238931 AAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA---GTGCCAAAAGCAGG 238875
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || ||||| || | ||||| || | ||| || || | |||||||| || |||
Sbjct 238874 CGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAAGCTTG 238815
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAA--GCC-CATTGGACAATC 74696
|| ||||| || || |||| ||||| ||| | | |||| ||| || | | |
Sbjct 238814 CATGGCAGAGCATCTGTGAGGAACTCCTGCTCAA--TAGCAACTGCCTCAACGATGATGC 238757
Query 74697 T-TGTGAATGTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTA-AAGCGTCACGGCAA 74754
| || | || || || ||| | | ||| ||| ||| | | | | || ||| |
Sbjct 238756 TCTGCACAAGTGCCTGATCTGG--CTTGTTCTTCAAGTGCGAGAACAGGAGACA-GGCGA 238700
Query 74755 ACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCA 74814
| || ||| || ||||| | | || | || ||||| || | |||||||| ||
Sbjct 238699 AGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGCCAGCCA 238640
Query 74815 TAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTT 74874
| || ||||||||||||| ||| |||||||| ||||||||| |||||||| || |
Sbjct 238639 TGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGATACCCT 238580
Query 74875 CGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCA---TCGGAAGTCATCCAAG 74931
| ||| || || || || | || | ||||| | | | | | | |||||
Sbjct 238579 CAACAGCGGCGAAAGCAACCAATCGGAGGGCGAATGTGGAATTTTTGTCCGAGATCCATC 238520
Query 74932 TCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAAGAGG 74990
| ||||| ||||| ||| | | ||| |||| ||||||| || | ||| ||
Sbjct 238519 GCAACGCCCAGTCAGC-CTTCTTACGGATGCACGGGATGTTATCGATGGCGTTGAACAGA 238461
Query 74991 CTTGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCG 75048
|| ||| || | || || ||| ||||||| | || ||||| || || |
Sbjct 238460 TATG--TTCGCTGCTTTGGCTCGCTGATATATGTGTCAATAAGGAGGGAGTATGTTTCGG 238403
Query 75049 AATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTA 75108
| || || ||| | | |||| | | ||||| | || ||||||| ||||| |
Sbjct 238402 AGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGTGCCTCTGGGATCTGAA 238343
Query 75109 CATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAA 75166
| || |||| || | | | ||||| |||| |||||||| || || |||||
Sbjct 238342 CCTCAGAGCTGAAGCGCTC--GACAAGGTTCTCGTTGACAATGCCGTCTGATGCTGCGAA 238285
Query 75167 AAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGTCCCAATC 75223
||||| || || | ||| ||| ||||| || ||| ||||| |||| ||||||
Sbjct 238284 GAAAGCGAGAACGTGTGAGATGAAGAATCGCTCGTCATCATTGAGTCGCTTGTTCCAATC 238225
Query 75224 CTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
| ||| ||| | || |||||||||||| | ||||||||
Sbjct 238224 GTGCAGATCCTTGGACAGATCAATCTCCTCTGCGGTCCAGAA 238183
>seq33
Length=264817
Score = 111 bits (122), Expect = 2e-19
Identities = 189/268 (71%), Gaps = 6/268 (2%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|||||||| ||||| ||||| || || || || ||||| |||| || || ||||| | |
Sbjct 137658 CCAGTTCCAATACCGTCTGCCCCGTTGATGAGGATCATGGGCAAGATCGGCACGTACATC 137599
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| ||||| | || ||||| ||| ||| | |||| || | ||| ||| |
Sbjct 137598 TCCGGCTCGATGGTTTTGCCATCGTCGGTGTTGTAGGTAAGCAGAGCTTCGTCGCTCTGG 137539
Query 117272 TCGAATATGT-TCTTGGTCCAC-GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAG 117329
| || ||| ||||| | | || | || | ||| |||||||||||| || || |
Sbjct 137538 TGAAAAATGGCTCTTG--CAAGTGGCGACAGCCTCGTGTAAATGTAACGAGGACTGGCCG 137481
Query 117330 CATCCTTGCCACCA-GCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388
| || || ||||| |||| ||| | ||||| | ||||| ||||| | | ||||| |
Sbjct 137480 CGTCGTTACCACCTTGCAA-ACGGGAGCCGAAGTTACCACTTGGCTCGAGAATGTTCATG 137422
Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCA 117416
||||| | ||||||||||||||||||||
Sbjct 137421 TTGTTAGAGCCCACAAAGTTTTGAGCCA 137394
Score = 82.4 bits (90), Expect = 8e-11
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 119075 CTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CTC 119133
||| | | ||||| |||||||||||||||||||| ||||||||||| || | || |||
Sbjct 135612 CTGTAGATGTTGGTGAGCTTGGCACCGTATCCGTTGCGACCACCGGTGAC-CTTTGCCTC 135554
Query 119134 CTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||| ||||||||| ||| | || || || || || | ||| |||||
Sbjct 135553 TTCGTCGTCGTAGTTGGACGAGGTGAGCAGATGACCGAAAATCATCTCCGGGAT 135500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212641461800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |