Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 183 3e-41 seq25 163 3e-35 seq12 102 9e-17 seq64 100 3e-16 seq31 91.5 2e-13 >seq8 Length=557162 Score = 183 bits (202), Expect = 3e-41 Identities = 799/1239 (64%), Gaps = 35/1239 (3%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGAT-GCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597 ||||||||||||| ||| ||| | ||| | ||| | ||||| ||| | | |||||||| Sbjct 459395 CCCCACATGTCGTACTG-AAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTCTCGTA 459453 Query 80598 CGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657 || || | ||| ||| ||||| ||||| || ||| || || || || ||| ||| Sbjct 459454 TGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTC 459513 Query 80658 AAAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716 |||| |||| | | || | |||| || |||||| | || | | || Sbjct 459514 GAAGATATGGATGTTGAGCTCCTTG-GCCTCGGGCGAGTCGAATGGCATACGGAGGGCCA 459572 Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776 ||| | ||||| || || | || || | | || || ||||| || ||| | || Sbjct 459573 AGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTT-GCTC 459631 Query 80777 GCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835 || ||||| || | ||||||| |||| | |||||| ||||| |||||| || Sbjct 459632 TTCCGTGCCTCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGAGTG 459691 Query 80836 ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA-- 80890 |||||| || || || ||||| |||| |||||||| | ||| | | ||| Sbjct 459692 ACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCGTTTTCGATGTCAACG 459751 Query 80891 -ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949 ||| ||| || || || |||| ||||| || || ||||| || | | | || Sbjct 459752 TATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTAC 459811 Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 || | |||||| |||||||| || ||| || || || || ||||| |||||||| | Sbjct 459812 TCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTC 459871 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 ||| |||| || |||||||| ||| | || || || |||||| ||| | | Sbjct 459872 TTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCA 459931 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129 || || || | ||| |||| | || || || || || ||||| | || Sbjct 459932 AGAATTGCATACCAGATCTTCTGGGCGCGAACGGTCTCACGACCCTTACCTTCTCTCTCA 459991 Query 81130 TACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188 || |||| |||| | | ||||| |||||| | |||| | | | |||||||| Sbjct 459992 TATCGCTCGTAGAGCTCCTT-GAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTC 460050 Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTT---CTCTACAGCCTTCATGAAAGCGTC 81245 || |||||||||||| ||| ||| |||| ||| || || |||||| || Sbjct 460051 ATTGGGGCACATCAGGGTCCA---AGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATC 460107 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304 |||||||| |||||| ||| || ||||| ||| || | ||||| | || ||||| Sbjct 460108 TGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCA-CGGACTTCCTCCTTGCCGTGGTTCT 460166 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 || | || | || | | || || || ||||||||||| || || | ||| | | Sbjct 460167 TACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGG 460226 Query 81365 ACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421 || ||| ||||||||||| |||||| || ||||| ||| | || | || Sbjct 460227 CACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCA 460286 Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481 |||| || | | ||| | || ||||| || || ||||| || || | || | Sbjct 460287 ACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCAC 460346 Query 81482 GCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCG 81539 | | ||| ||| || ||||| || || || | ||| || ||| |||||| Sbjct 460347 GGATATTG-TGAACATG-CAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGT 460404 Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599 || | ||| || || || || |||||||| || | |||||| ||| |||||| ||| Sbjct 460405 CTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGA 460464 Query 81600 TGACATCTGAGGGCTT--TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 | || || |||||| || || || |||| || ||||| | ||| || |||| Sbjct 460465 AGCCAACT--GGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAG 460522 Query 81658 TAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCGTGAAT 81716 || ||||| || || || || | | || | |||||| || ||||| || Sbjct 460523 TACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCT-CAATATCTTCTCCGTGGAT 460581 Query 81717 ACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 ||||| || |||||||| | ||| | ||| || |||| Sbjct 460582 ACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTC 460620 >seq25 Length=313491 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| |||||||||||||| ||||| || ||||| || || Sbjct 101462 ATGCAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTCA 101403 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || ||||| || |||||||| || || || |||||| Sbjct 101402 GACACTATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 101343 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| |||||||||| || || || ||||||| || Sbjct 101342 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGGACACTTTCAGACTACAAC 101283 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || || | || ||||| || || ||||| || Sbjct 101282 ATCCAGAAGGAGTCTACCCTGCACTTGGTGTTGCGCCTGCGTGGTGGCCA 101233 Score = 156 bits (172), Expect = 5e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || || || ||||||||||| Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||||||||||||||| || || || |||||| Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| || ||||||| || ||||| ||| ||||| || Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGC-GACTACAA 101512 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || || | || || || ||||| Sbjct 101511 CATCCAGAAGGAATCCACGCTACACCTTGTGCTCCGCCTCCGTGGTGG 101464 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| ||| | |||| ||| | ||| Sbjct 101894 ACTGGCAAGACAATCACCCTCGAGGTGGAGTCTTCTGACACGATTGACAATGTAAAGAGC 101835 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| |||||||| ||||||||||| | || || || || ||| Sbjct 101834 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCAGGCAAG 101775 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || |||||||||| ||| ||||| ||| ||||| || | || ||||| ||| || || Sbjct 101774 CAGCTCGAGGATGGTCGCACCCTCAGC-GACTACAACATTCAGAAGGAGAGCACCCTCCA 101716 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 101715 CCTTGTCCTTCGTCTGCGTGGTGG 101692 >seq12 Length=397188 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || ||||||||||| || || || || || ||||| |||||| Sbjct 53309 GACAAGGAGGGGATCCCACCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 53250 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || ||||| | ||||| || |||| ||||| ||| || ||||| ||| | Sbjct 53249 GATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGAGCACCCTCCATCTCGTCCTC 53190 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 53189 CGTCTGCGTGGTGG 53176 >seq64 Length=168546 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 ||| | ||| || ||||| || || |||||||| || || || || || ||||| | || Sbjct 20609 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGA 20668 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | ||| | ||| | ||| || || || ||||||||||| ||||| || |||||||| Sbjct 20669 CACCATCGACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCA 20728 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 |||| | || || || || ||||| || || |||| || || || | ||||| || | Sbjct 20729 GCGTTTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACAT 20788 Query 27588 CCAAAAGG 27595 || |||| Sbjct 20789 TCAGAAGG 20796 >seq31 Length=267444 Score = 91.5 bits (100), Expect = 2e-13 Identities = 285/440 (65%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 ||||| ||| ||| || || || |||||||| || || ||| | || |||||||| Sbjct 238564 GCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTG 238623 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || ||||| || || ||| | || || | || ||||||||||| ||||| || || ||| Sbjct 238624 AAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAG 238683 Query 64846 GGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCACAT 64905 || | ||| ||| || || | ||||||| ||| | ||| |||| ||| || Sbjct 238684 GGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACAAGCCAGATCA- 238742 Query 64906 GGGACTATAATTGATATAGTAAAATC-----GGCTGTAGAAATTGAAAAGGAATTCATTA 64960 || ||| | | || | ||| ||| || | ||||| |||| ||| | | Sbjct 238743 GGCACT----TGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCA 238798 Query 64961 CTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTATATCG 65020 | | || || || || || |||||||| | || | | ||| ||| || |||| Sbjct 238799 CAGATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCG 238858 Query 65021 AATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAATTCTTCAA 65080 | || || || || ||||||||| | || | ||| | || || | | | Sbjct 238859 AGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTCTACAACGCCACCA 238918 Query 65081 ATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAAAGA 65140 | ||||| |||| ||||||| ||| |||| || ||||| ||||| || || ||| Sbjct 238919 ACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGC 238978 Query 65141 GGGTAGGTGATTACTCAAAG 65160 | || || || ||| |||| Sbjct 238979 GTGTTGGCGAGTACCAAAAG 238998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306899719920