Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq8 183 3e-41
seq25 163 3e-35
seq12 102 9e-17
seq64 100 3e-16
seq31 91.5 2e-13
>seq8
Length=557162
Score = 183 bits (202), Expect = 3e-41
Identities = 799/1239 (64%), Gaps = 35/1239 (3%)
Strand=Plus/Plus
Query 80539 CCCCACATGTCGTGCTGCAAGAT-GCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597
||||||||||||| ||| ||| | ||| | ||| | ||||| ||| | | ||||||||
Sbjct 459395 CCCCACATGTCGTACTG-AAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTCTCGTA 459453
Query 80598 CGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657
|| || | ||| ||| ||||| ||||| || ||| || || || || ||| |||
Sbjct 459454 TGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTC 459513
Query 80658 AAAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716
|||| |||| | | || | |||| || |||||| | || | | ||
Sbjct 459514 GAAGATATGGATGTTGAGCTCCTTG-GCCTCGGGCGAGTCGAATGGCATACGGAGGGCCA 459572
Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776
||| | ||||| || || | || || | | || || ||||| || ||| | ||
Sbjct 459573 AGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTT-GCTC 459631
Query 80777 GCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835
|| ||||| || | ||||||| |||| | |||||| ||||| |||||| ||
Sbjct 459632 TTCCGTGCCTCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGAGTG 459691
Query 80836 ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA-- 80890
|||||| || || || ||||| |||| |||||||| | ||| | | |||
Sbjct 459692 ACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCGTTTTCGATGTCAACG 459751
Query 80891 -ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949
||| ||| || || || |||| ||||| || || ||||| || | | | ||
Sbjct 459752 TATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTAC 459811
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|| | |||||| |||||||| || ||| || || || || ||||| |||||||| |
Sbjct 459812 TCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTC 459871
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
||| |||| || |||||||| ||| | || || || |||||| ||| | |
Sbjct 459872 TTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCA 459931
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
|| || || | ||| |||| | || || || || || ||||| | ||
Sbjct 459932 AGAATTGCATACCAGATCTTCTGGGCGCGAACGGTCTCACGACCCTTACCTTCTCTCTCA 459991
Query 81130 TACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188
|| |||| |||| | | ||||| |||||| | |||| | | | ||||||||
Sbjct 459992 TATCGCTCGTAGAGCTCCTT-GAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTC 460050
Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTT---CTCTACAGCCTTCATGAAAGCGTC 81245
|| |||||||||||| ||| ||| |||| ||| || || |||||| ||
Sbjct 460051 ATTGGGGCACATCAGGGTCCA---AGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATC 460107
Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304
|||||||| |||||| ||| || ||||| ||| || | ||||| | || |||||
Sbjct 460108 TGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCA-CGGACTTCCTCCTTGCCGTGGTTCT 460166
Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364
|| | || | || | | || || || ||||||||||| || || | ||| | |
Sbjct 460167 TACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGG 460226
Query 81365 ACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421
|| ||| ||||||||||| |||||| || ||||| ||| | || | ||
Sbjct 460227 CACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCA 460286
Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481
|||| || | | ||| | || ||||| || || ||||| || || | || |
Sbjct 460287 ACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCAC 460346
Query 81482 GCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCG 81539
| | ||| ||| || ||||| || || || | ||| || ||| ||||||
Sbjct 460347 GGATATTG-TGAACATG-CAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGT 460404
Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599
|| | ||| || || || || |||||||| || | |||||| ||| |||||| |||
Sbjct 460405 CTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGA 460464
Query 81600 TGACATCTGAGGGCTT--TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657
| || || |||||| || || || |||| || ||||| | ||| || ||||
Sbjct 460465 AGCCAACT--GGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAG 460522
Query 81658 TAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCGTGAAT 81716
|| ||||| || || || || | | || | |||||| || ||||| ||
Sbjct 460523 TACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCT-CAATATCTTCTCCGTGGAT 460581
Query 81717 ACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755
||||| || |||||||| | ||| | ||| || ||||
Sbjct 460582 ACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTC 460620
>seq25
Length=313491
Score = 163 bits (180), Expect = 3e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| |||||||||||||| ||||| || ||||| || ||
Sbjct 101462 ATGCAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTCA 101403
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || ||||| || |||||||| || || || ||||||
Sbjct 101402 GACACTATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 101343
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||||||||| |||||||||| || || || ||||||| ||
Sbjct 101342 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGGACACTTTCAGACTACAAC 101283
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || || | || ||||| || || ||||| ||
Sbjct 101282 ATCCAGAAGGAGTCTACCCTGCACTTGGTGTTGCGCCTGCGTGGTGGCCA 101233
Score = 156 bits (172), Expect = 5e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | ||||||||||| || || || |||||||||||
Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | || ||||||||||||||||| || || || ||||||
Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || || || || ||||| || ||||||| || ||||| ||| ||||| ||
Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGC-GACTACAA 101512
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || || || || | || || || |||||
Sbjct 101511 CATCCAGAAGGAATCCACGCTACACCTTGTGCTCCGCCTCCGTGGTGG 101464
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||| ||||| ||| | |||| ||| | |||
Sbjct 101894 ACTGGCAAGACAATCACCCTCGAGGTGGAGTCTTCTGACACGATTGACAATGTAAAGAGC 101835
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| |||||||| ||||||||||| | || || || || |||
Sbjct 101834 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCAGGCAAG 101775
Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|| |||||||||| ||| ||||| ||| ||||| || | || ||||| ||| || ||
Sbjct 101774 CAGCTCGAGGATGGTCGCACCCTCAGC-GACTACAACATTCAGAAGGAGAGCACCCTCCA 101716
Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||| || |||||
Sbjct 101715 CCTTGTCCTTCGTCTGCGTGGTGG 101692
>seq12
Length=397188
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || ||||||||||| || || || || || ||||| ||||||
Sbjct 53309 GACAAGGAGGGGATCCCACCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 53250
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || |||| ||||| ||| || ||||| ||| |
Sbjct 53249 GATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGAGCACCCTCCATCTCGTCCTC 53190
Query 27619 CGTCTTCGCGGTGG 27632
||||| || |||||
Sbjct 53189 CGTCTGCGTGGTGG 53176
>seq64
Length=168546
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| | ||| || ||||| || || |||||||| || || || || || ||||| | ||
Sbjct 20609 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGA 20668
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| ||| | ||| | ||| || || || ||||||||||| ||||| || ||||||||
Sbjct 20669 CACCATCGACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCA 20728
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587
|||| | || || || || ||||| || || |||| || || || | ||||| || |
Sbjct 20729 GCGTTTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACAT 20788
Query 27588 CCAAAAGG 27595
|| ||||
Sbjct 20789 TCAGAAGG 20796
>seq31
Length=267444
Score = 91.5 bits (100), Expect = 2e-13
Identities = 285/440 (65%), Gaps = 10/440 (2%)
Strand=Plus/Plus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
||||| ||| ||| || || || |||||||| || || ||| | || ||||||||
Sbjct 238564 GCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTG 238623
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|| ||||| || || ||| | || || | || ||||||||||| ||||| || || |||
Sbjct 238624 AAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAG 238683
Query 64846 GGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCACAT 64905
|| | ||| ||| || || | ||||||| ||| | ||| |||| ||| ||
Sbjct 238684 GGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACAAGCCAGATCA- 238742
Query 64906 GGGACTATAATTGATATAGTAAAATC-----GGCTGTAGAAATTGAAAAGGAATTCATTA 64960
|| ||| | | || | ||| ||| || | ||||| |||| ||| | |
Sbjct 238743 GGCACT----TGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCA 238798
Query 64961 CTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTATATCG 65020
| | || || || || || |||||||| | || | | ||| ||| || ||||
Sbjct 238799 CAGATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCG 238858
Query 65021 AATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAATTCTTCAA 65080
| || || || || ||||||||| | || | ||| | || || | | |
Sbjct 238859 AGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTCTACAACGCCACCA 238918
Query 65081 ATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAAAGA 65140
| ||||| |||| ||||||| ||| |||| || ||||| ||||| || || |||
Sbjct 238919 ACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGC 238978
Query 65141 GGGTAGGTGATTACTCAAAG 65160
| || || || ||| ||||
Sbjct 238979 GTGTTGGCGAGTACCAAAAG 238998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570306899719920
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