Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq25 109 5e-19
seq64 84.2 2e-11
>seq25
Length=313491
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||||||| | || || || || || || ||||
Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | ||||| || ||||| ||||| || ||||| |||||||| ||
Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||||||||| || | || || | ||| | ||| ||||||
Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAAC 101511
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || |||| | || | || | || ||||||||
Sbjct 101510 ATCCAGAAGGAATCCACGCTACACCTTGTGCTCCGCCTCCGTGGTGGCAT 101461
>seq64
Length=168546
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| ||||| || || || |||||| | || || || ||||| || | |||| | ||
Sbjct 20616 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGACACCATC 20675
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || |||||||| || ||||| ||||| || || ||||||||
Sbjct 20676 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCAGCGTTTG 20735
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | |||||| || || | ||||| | || | || || ||||||||||| |||
Sbjct 20736 ATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACATTCAGAAG 20795
Query 27177 G 27177
|
Sbjct 20796 G 20796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915730688320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |