Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq25 109 5e-19 seq64 84.2 2e-11 >seq25 Length=313491 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || |||| Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || ||||| ||||| || ||||| |||||||| || Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || || | ||| | ||| |||||| Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAAC 101511 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || |||| | || | || | || |||||||| Sbjct 101510 ATCCAGAAGGAATCCACGCTACACCTTGTGCTCCGCCTCCGTGGTGGCAT 101461 >seq64 Length=168546 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || ||||| || || || |||||| | || || || ||||| || | |||| | || Sbjct 20616 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGACACCATC 20675 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || |||||||| || ||||| ||||| || || |||||||| Sbjct 20676 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCAGCGTTTG 20735 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | |||||| || || | ||||| | || | || || ||||||||||| ||| Sbjct 20736 ATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACATTCAGAAG 20795 Query 27177 G 27177 | Sbjct 20796 G 20796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915730688320