Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq25 149 1e-30
seq64 118 2e-21
seq12 93.3 1e-13
>seq25
Length=313491
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||||| || || |||||||| || || ||||| | |||||
Sbjct 101479 AGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 101538
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| || || | || |||||||||
Sbjct 101539 TCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC 101598
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || || ||||| || ||||||||||| ||||| |||
Sbjct 101599 TGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTC 101658
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 101659 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Score = 141 bits (156), Expect = 2e-28
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||| ||| || || ||||| || || ||||| | |||||
Sbjct 101707 AGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCC 101766
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||||||||||||||| | ||| || ||||| ||||||| || |||||||||
Sbjct 101767 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 101826
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || || |||||||| || |||||||| ||||| |||
Sbjct 101827 TGGATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTC 101886
Query 211083 TTTCCCGT 211090
|| || ||
Sbjct 101887 TTGCCAGT 101894
>seq64
Length=168546
Score = 118 bits (130), Expect = 2e-21
Identities = 136/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || ||||| || |||| || || | |||||||| |||||||| || ||||||||
Sbjct 20794 TTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 20735
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| || || ||||| || |||| || |||||||| |||||||| || || || |||
Sbjct 20734 AAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCG 20675
Query 211047 ATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| ||||| ||||| || ||||| ||||||||
Sbjct 20674 ATGGTGTCGCTAGA---CTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACG 20618
Query 211104 AA 211105
||
Sbjct 20617 AA 20616
>seq12
Length=397188
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || || ||| ||| || |||||||| || |||| ||||| | |||||
Sbjct 53191 AGGACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 53250
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| ||||| || ||||| || || | || ||||||||
Sbjct 53251 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATCCCCTCCTTGTC 53309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159144707847215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |