Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq25 86.0 5e-12 >seq25 Length=313491 Score = 86.0 bits (94), Expect = 5e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || ||| || | | ||| | ||| | ||||||||| || || || || Sbjct 101451 AAATATTTGCATGCCACCACGGAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGAT 101510 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 || || ||| || || || | || |||||||| ||||| || || || || ||||| Sbjct 101511 GTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTG 101570 Query 39165 CTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTAT 39223 |||||||| || | || ||| |||||| || ||| |||| ||| | | | ||| | Sbjct 101571 CTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCAATCGTGT 101629 Query 39224 CGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCA 39283 | |||||| || || | ||||| | || || |||| || || || ||||| |||| Sbjct 101630 CCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCA 101689 Query 39284 T 39284 | Sbjct 101690 T 101690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543029572283