Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq25 118 3e-21
seq64 113 1e-19
>seq25
Length=313491
Score = 118 bits (130), Expect = 3e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| ||| || || || | ||||| ||| | || | |||||
Sbjct 101707 AGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCC 101766
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| | || || ||||| || |||||||| ||||||||
Sbjct 101767 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 101826
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| || || ||||| || | ||||| || | ||||| |||
Sbjct 101827 TGGATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTC 101886
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 101887 TTGCCAGTCA 101896
Score = 107 bits (118), Expect = 5e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || | ||| || || || || || |||| ||||| || | | ||
Sbjct 101241 ACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGT 101300
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| || || || ||||| || || || ||
Sbjct 101301 CCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCC 101360
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||| ||||| ||| || ||||| |||||||| | |||||| || |
Sbjct 101361 CTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAG 101420
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||||||| || | || || | || | ||||||
Sbjct 101421 TGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462
>seq64
Length=168546
Score = 113 bits (124), Expect = 1e-19
Identities = 127/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594
||||| || | || ||| | |||||||| |||||||| || |||||||| | || ||
Sbjct 20785 TTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGC 20726
Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654
||||| || ||||| || ||||||||||||||||| ||| ||| |||||||||||
Sbjct 20725 TGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCG 20666
Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
| || || || | |||||| |||||||| || | || |||| |||
Sbjct 20665 CTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 20616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192523697860754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |