Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq25 118 3e-21 seq64 113 1e-19 >seq25 Length=313491 Score = 118 bits (130), Expect = 3e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||| || || || | ||||| ||| | || | ||||| Sbjct 101707 AGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCC 101766 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || ||||| || |||||||| |||||||| Sbjct 101767 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 101826 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || || ||||| || | ||||| || | ||||| ||| Sbjct 101827 TGGATCTTGCTCTTTACATTGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTC 101886 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 101887 TTGCCAGTCA 101896 Score = 107 bits (118), Expect = 5e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | ||| || || || || || |||| ||||| || | | || Sbjct 101241 ACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGT 101300 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| || || || ||||| || || || || Sbjct 101301 CCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCC 101360 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||||| ||| || ||||| |||||||| | |||||| || | Sbjct 101361 CTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAG 101420 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | || | |||||| Sbjct 101421 TGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462 >seq64 Length=168546 Score = 113 bits (124), Expect = 1e-19 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| || | || ||| | |||||||| |||||||| || |||||||| | || || Sbjct 20785 TTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGC 20726 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 ||||| || ||||| || ||||||||||||||||| ||| ||| ||||||||||| Sbjct 20725 TGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCG 20666 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 | || || || | |||||| |||||||| || | || |||| ||| Sbjct 20665 CTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 20616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192523697860754