Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8 138 2e-27 >seq8 Length=557162 Score = 138 bits (152), Expect = 2e-27 Identities = 454/701 (65%), Gaps = 6/701 (1%) Strand=Plus/Plus Query 77928 AATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAG 77987 || ||||| || | || ||| ||| |||||||| ||||| |||||||||| | ||| Sbjct 460013 AACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAA 460072 Query 77988 TCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 78047 || | | || || || | ||| |||||||| || ||||| || || || ||| Sbjct 460073 GTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGA 460132 Query 78048 TCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATA 78107 || || | | ||| || || || ||||| || || | |||| | | | Sbjct 460133 TCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACA 460192 Query 78108 TCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGA 78167 || | |||||||| || || || || || | | || || || || || || ||||| Sbjct 460193 TCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGG 460252 Query 78168 TCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTT 78227 || | || | || ||||| || || ||||||||||| || | || |||||| ||||| Sbjct 460253 TCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTGGATGTG 460312 Query 78228 CCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA--ATGGATATCCCTA 78285 || || || ||| ||||| ||| | || || ||||| | ||| | | || | Sbjct 460313 CCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAACATGCAGA--CCAA 460370 Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345 | || || || |||| || || | ||| || || | || |||||||| || || | Sbjct 460371 TACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGA 460430 Query 78346 TACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 78405 | ||||||||| ||||| || | || ||| || || || || ||||| | Sbjct 460431 TGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCAG 460490 Query 78406 CATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTT 78464 | | || | || || || ||||| || || | || || | |||| |||||||| Sbjct 460491 CGCTGAAAAGCGTTGGCGACGCATGTGTGAAGTACTTCAGCGACATGTAG-TTGTATGTC 460549 Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524 ||||| || | || || || | || || || ||||| |||||||| | ||| ||| Sbjct 460550 TCAATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACACGCATGATCATCTGC 460609 Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584 || ||||| ||| | ||| | ||| | | | ||||||| |||| ||| || Sbjct 460610 TGCGGTCTCTCAGCGACCTTGCCGTCGATTCTGAGAAGGTATGATCGCTCCAGAGTCTTG 460669 Query 78585 AAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 || || || || | ||| ||||| | ||||| | ||| Sbjct 460670 AAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACAAT 460710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664536470240