Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 2e-15 seq64 93.3 1e-13 >seq25 Length=313491 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || || || || || || ||||||||||| ||| | || | Sbjct 101472 GAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCG 101531 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | ||||||||| | | ||| || || Sbjct 101532 GCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTC 101591 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||||| | || | |||| || ||| || || || || Sbjct 101592 CTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGT 101651 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | ||||| ||||||| |||||| Sbjct 101652 GATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || |||||||| || ||||||||||| || | | || | ||||| || | Sbjct 101256 CAAG-TGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGTCCGGCCATCCTCGA 101314 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | ||||||||| | | ||| || ||||| ||||||| Sbjct 101315 GCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAA 101374 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | |||||||| || || || || ||||| || |||| Sbjct 101375 TCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATTGTCTTGC 101434 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || |||||||| || | ||||| Sbjct 101435 CGGTAAGTGTCTTCACAAATATTTGCAT 101462 >seq64 Length=168546 Score = 93.3 bits (102), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || || |||||||| || | | ||| | |||||||| || ||||| |||||||||| Sbjct 20794 TTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTT--CCGGCGAAGA 20737 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | ||||||||||| | || || ||||| ||||| || || |||||| | | Sbjct 20736 TCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGT 20677 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||| | ||| ||||| || || || || ||||| ||||| ||||| |||| Sbjct 20676 CGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 20617 Query 152095 AG 152096 || Sbjct 20616 AG 20615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813541385461