Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq25 145 2e-29 seq64 113 1e-19 >seq25 Length=313491 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || || || || || || || || |||||||||||| |||||| Sbjct 101459 CAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTCAGAC 101400 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||| || || || || ||||| || |||||||| Sbjct 101399 ACTATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAGCAG 101340 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| ||||| |||| ||| | || || ||| || Sbjct 101339 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGGACACTTTCAGACTACAACATC 101280 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 101279 CAGAAGGAGTCTACCCTGCA-CTTG 101256 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || |||||||||||||| || || ||| Sbjct 101687 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCGGAC 101628 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 101627 ACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAGCAG 101568 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || || ||| || ||| || Sbjct 101567 CGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAACATC 101508 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 101507 CAGAAGGAATCCACGCTACACCTTGT 101482 Score = 104 bits (114), Expect = 6e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||||||||||||||| || ||||| || || || || || Sbjct 101894 ACTGGCAAGACAATCACCCTCGAGGTGGAGTCTTCTGACACGATTGACAATGTAAAGAGC 101835 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || |||||||||||||| || | |||||||| || || Sbjct 101834 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCAGGCAAG 101775 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| ||||| | || || ||| || ||| | || || || || || || Sbjct 101774 CAGCTCGAGGATGGTCGCACCCTCAGCGACTACAACATTCAGAAGGAGAGCACCCTCCAC 101715 Query 178125 CTTGT 178129 ||||| Sbjct 101714 CTTGT 101710 >seq64 Length=168546 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986 ||||| || || ||||| || || || ||||| ||||| || || ||| |||||| Sbjct 20616 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGC---GACACC 20672 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| || ||||| ||||| || ||||| || || || || ||||||||||| || Sbjct 20673 ATCGACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCAGCGT 20732 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | |||||||||||||| ||||| |||||||| | ||||| | || || ||| | || Sbjct 20733 TTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACATTCAG 20792 Query 178107 AA 178108 || Sbjct 20793 AA 20794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723627402254