Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2106 120 6e-22 seq1917 84.2 5e-11 >seq2106 Length=142898 Score = 120 bits (132), Expect = 6e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 |||||||| || | || ||| | ||||||||||| || || || ||||| | || | Sbjct 23881 GGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAGACCGTCTGTTGTTG 23940 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 ||||| || || |||| | |||||| | | ||||| || | || |||||| |||| Sbjct 23941 GCACTCGGCAACCAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACATT 24000 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || ||| || ||||||||||| ||||| |||||||| ||||||| |||| | ||||| Sbjct 24001 TCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGT 24060 Query 230632 GTGATGAAG 230640 || ||| || Sbjct 24061 GTCATGGAG 24069 >seq1917 Length=177239 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055 ||| || ||| || ||||||||||||| ||||| || |||||| | |||||||| Sbjct 31952 GTCGTCGCCGTTAGCGTAACGCCATTGGAGGTACTGATTTGGTGTCTTCTCAAGATGCAT 32011 Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115 ||| | ||| | || ||| ||||| | ||| ||| ||||| || ||||||||| Sbjct 32012 CTCAACGTGCTCGAGAGCGTGCTGCTTAATGTATCCAATACGCAAGTTAGGATGCTTCTC 32071 Query 319116 AACACTACC-GATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCC 319174 ||||| ||| ||| |||| | | || || || | ||||| ||||| ||| || | Sbjct 32072 AACACGACCGGATTGTGGAAT-GACTTCGCCAGTCAAGACCTTGATGAGAGTGGACTTTC 32130 Query 319175 CCGCACCGTT 319184 | || ||||| Sbjct 32131 CTGCTCCGTT 32140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057788408850380