Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 120 6e-22
seq1917 84.2 5e-11
>seq2106
Length=142898
Score = 120 bits (132), Expect = 6e-22
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
|||||||| || | || ||| | ||||||||||| || || || ||||| | || |
Sbjct 23881 GGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAGACCGTCTGTTGTTG 23940
Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571
||||| || || |||| | |||||| | | ||||| || | || |||||| ||||
Sbjct 23941 GCACTCGGCAACCAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACATT 24000
Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631
|| ||| || ||||||||||| ||||| |||||||| ||||||| |||| | |||||
Sbjct 24001 TCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGT 24060
Query 230632 GTGATGAAG 230640
|| ||| ||
Sbjct 24061 GTCATGGAG 24069
>seq1917
Length=177239
Score = 84.2 bits (92), Expect = 5e-11
Identities = 134/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055
||| || ||| || ||||||||||||| ||||| || |||||| | ||||||||
Sbjct 31952 GTCGTCGCCGTTAGCGTAACGCCATTGGAGGTACTGATTTGGTGTCTTCTCAAGATGCAT 32011
Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115
||| | ||| | || ||| ||||| | ||| ||| ||||| || |||||||||
Sbjct 32012 CTCAACGTGCTCGAGAGCGTGCTGCTTAATGTATCCAATACGCAAGTTAGGATGCTTCTC 32071
Query 319116 AACACTACC-GATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCC 319174
||||| ||| ||| |||| | | || || || | ||||| ||||| ||| || |
Sbjct 32072 AACACGACCGGATTGTGGAAT-GACTTCGCCAGTCAAGACCTTGATGAGAGTGGACTTTC 32130
Query 319175 CCGCACCGTT 319184
| || |||||
Sbjct 32131 CTGCTCCGTT 32140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057788408850380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |