Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2106 140 3e-28 >seq2106 Length=142898 Score = 140 bits (154), Expect = 3e-28 Identities = 465/719 (65%), Gaps = 6/719 (1%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | ||| || || ||||||||||| || ||||| | ||||| || |||||| Sbjct 24050 TGGTAGTCACCAACACGCTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCC 23991 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || | | | || ||| | | | Sbjct 23990 ATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTGG--TTGCCGAGTGCCAACAACA 23933 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAGA 16852 | || || ||||| || || || |||||||| | || ||| ||||| || | || Sbjct 23932 GACGGTCTGCGACAAACTCGATGTACTGGCACATGAGCTTGGCA-TTCATGCCGAGGAGC 23874 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || || || || || || | ||| |||||| || | || || || || || Sbjct 23873 ATGACGGGGAGCGCATCTGTGAGGAATTCTTGCTCAATTGCGACAGCCTCGACGATGATG 23814 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || || || ||| | | || || || |||| ||| || ||||| Sbjct 23813 CTCTGCACGAGTGATGCGTCCGGCTTGTTCTTGAGGTGGGAGAACAGCAGGCACGCGAAG 23754 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || || | |||||||| | ||| | |||||| || || || | |||| ||| Sbjct 23753 TCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAGACCGGCCATG 23694 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || || ||||| ||||| || || | |||||||||||||| ||||| ||||||||| Sbjct 23693 AGACCACGCTTCTTCAACCAGAAGATGGACGCGAACGACCCAGAGAAGAAGATACCCTCG 23634 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 || | || || ||||| | ||| ||| | |||| | |||| | |||||| | Sbjct 23633 ACAGCAGCGAAAGCGATCAGTCGGCAGGCAAAGGTCGAATTCTTGTCAGAGATCCATCGC 23574 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 |||| || || || | || || || | || ||||| || || | | Sbjct 23573 AATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTATCGATGGCGTTGAAGAGATAT 23514 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | | || | ||| | || || || ||||| || ||| ||| |||| ||||| Sbjct 23513 GATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGG 23454 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 ||||||||||| ||||| |||||||| |||||||| ||||| | ||| || ||||| Sbjct 23453 ATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCAGGTATCTGTACTTCA 23394 Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | ||| || || | || || ||||| || || || || |||||||| || || Sbjct 23393 CTGCTGAAACGCTCAACCAGGTTCTCGTTGACAATTCCATCAGATGCGGCGAAGAAAGC 23335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517528611565680