Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 266 3e-66
seq1950 118 1e-21
seq2084 98.7 1e-15
seq1821 96.9 4e-15
>seq2106
Length=142898
Score = 266 bits (294), Expect = 3e-66
Identities = 542/791 (69%), Gaps = 13/791 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| || || || ||||| |||||||| | |||||| | || |||
Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265
Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | | | |||||||| ||||||| | ||||||
Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || || || |||||||| || || || ||||||||||| ||||| ||||||
Sbjct 23326 CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAGCGT 23385
Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| ||| || || ||| | | || || || ||||||||||| || |||||| ||
Sbjct 23386 TTC-AGCAGTGAAGTACAGATACCTGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 23444
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931
||||||| | |||||||||| || || || |||||||| ||| | || | |
Sbjct 23445 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 23504
Query 116932 GGAGAAGCTC-CGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990
| || | || | | || ||||||||||| | || || || || ||||||| |
Sbjct 23505 GCAG-CGATCATATCTCTTCAACGCCATCGATAACATCCCATGTATCCGTAAGAAGGCTG 23563
Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGGCC 117049
| ||||| |||| |||||| | | || ||| || |||| | | || ||| | ||
Sbjct 23564 ACTGGGCATTGCGATGGATCTCTGACA-AGAATTCGACCTTTGCCTGCCGACTGATCGCT 23622
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
||||| || |||||||| ||||||| || || ||||| |||| || ||| | |||
Sbjct 23623 TTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTGAAG 23682
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| || || |||||| |||| || || ||| ||||| | ||||| | ||||||||
Sbjct 23683 AAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGGC 23742
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229
|||| ||||| || || |||||||| || | | | ||| ||| |
Sbjct 23743 ATGCACACAGACTTCGCGTGCCTGCTGTTCTCCCACCTCAAGAACAAGCCGGACGCATCA 23802
Query 117230 CGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288
| ||| ||| | ||| || ||| || ||||| || ||||| |||||||| || ||
Sbjct 23803 CTCGTGCAGAG-CATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACAGATGC 23861
Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347
||| || || || || || | || ||| || | |||| || ||||||||||| |
Sbjct 23862 GCTCCCCGTCATGCTCCTCGGCATGAA-TGCCAAGCTCATGTGCCAGTACATCGAGTTTG 23920
Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407
|||| ||| | ||| || | | || | | | ||| ||||||| | |||||||
Sbjct 23921 TCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAAGTTCTACAACGCCACCAACCCAT 23980
Query 117408 TGGACTTTATG 117418
| ||||| |||
Sbjct 23981 TCGACTTCATG 23991
>seq1950
Length=170036
Score = 118 bits (130), Expect = 1e-21
Identities = 151/208 (73%), Gaps = 5/208 (2%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC-----GAAG 40744
||||| || ||||| || || ||||| ||||| || ||||| | || || |||
Sbjct 63480 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTGAAGTGGAAT 63539
Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| | |||| | | | | ||||| || |||| ||||| ||||||||||| | |
Sbjct 63540 CATCAGACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAG 63599
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
||||||| || ||||||| ||| || || ||||| || |||| || || || | |||||
Sbjct 63600 ACCAGCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGGACACTGAGCGACT 63659
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||||||| ||| |||||
Sbjct 63660 ACAACATCCAGAAGGAGAGCACTCTGCA 63687
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| || || ||||||||| |||| || || | |
Sbjct 63252 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCA 63311
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || |||| ||||| ||||| || || | ||||||
Sbjct 63312 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCCGACCAG 63371
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| || || || || | || ||||| ||| ||||||
Sbjct 63372 CAGCGCTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGTCCGATTACAAC 63431
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| ||||| || ||
Sbjct 63432 ATCCAGAAGGAGTCCACTCTGCACCTTGT 63460
>seq2084
Length=280932
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| ||||| |||||||||| || | |||| ||| ||||| ||||| ||
Sbjct 181183 GACAAGGAGGGAATCCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAA 181242
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||||||| ||||||||||||||||||||| | || || || || || |
Sbjct 181243 GATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTCCTC 181302
Query 40903 CGCTTGAGGGGCGG 40916
||| || | || ||
Sbjct 181303 CGCCTGCGTGGTGG 181316
>seq1821
Length=46945
Score = 96.9 bits (106), Expect = 4e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| | || ||||| || |||||| |
Sbjct 19120 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACAATC 19179
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||| ||||| |||| ||||| || ||
Sbjct 19180 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGATCAGCAGCGTCTG 19239
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || ||| |||| || | ||||| | |||||||||||||| |||
Sbjct 19240 ATCTTCGCTGGAAAGCAGTTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAAG 19299
Query 40879 G 40879
|
Sbjct 19300 G 19300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515202287929760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |