Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 113 4e-20
seq1821 102 7e-17
>seq1950
Length=170036
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 5/215 (2%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || |||||||| ||||||| || || |||||
Sbjct 63694 CACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCGTCCTC 63635
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| ||||||| |||||||| || || || |||||||||||||||
Sbjct 63634 GAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTG 63575
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-----TGCTCTCGACCTCGACGGTCACC 118703
||| || || || | |||| |||||| | | | || || || | || |
Sbjct 63574 AATCTTCGACTTGACATTGTCGATGGTGTCTGATGATTCCACTTCACTTCAAGTGTGATA 63515
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||||||| || || || || || ||||||||
Sbjct 63514 GTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || ||||| |||||||| | |||||| |||||||| ||
Sbjct 63227 GTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGTTG 63168
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| | ||||||||||||||||| ||||| || ||||||||||| || ||
Sbjct 63167 CTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTT 63108
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| | | ||| ||||||| ||| | || ||||||||
Sbjct 63107 GCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 63048
Query 118715 CA 118716
||
Sbjct 63047 CA 63046
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||||||| || || || ||||||||| || || |||
Sbjct 63448 GTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCA 63389
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | |||||||| ||||| || || ||||||||||| ||| || ||
Sbjct 63388 GCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTTG 63329
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||| | ||| ||||||| ||| | || || || || || ||
Sbjct 63328 ACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTC 63269
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| || |||||
Sbjct 63268 TTGACAAAGATTTGCAT 63252
>seq1821
Length=46945
Score = 102 bits (112), Expect = 7e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
||||| |||||||| || || |||||| |||||| | ||| ||||||||| ||||
Sbjct 19298 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAGATC 19239
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|||||||||||||| || || || ||||||||||| || || || || | |||
Sbjct 19238 AGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 19179
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| | | ||||||||| | ||| | || ||||| || || || || || ||
Sbjct 19178 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 19120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433816515529192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |