Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq635 398 7e-106 seq1950 89.7 5e-13 seq1821 86.0 6e-12 >seq635 Length=74236 Score = 398 bits (440), Expect = 7e-106 Identities = 1225/1860 (66%), Gaps = 52/1860 (3%) Strand=Plus/Plus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCA-CGCGTAAAAATGTATC 22201 |||| || || || |||||||| ||||| ||||| | |||||| | ||| || || || Sbjct 34213 TGGTTCGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCCGTGAAG-TGCATG 34271 Query 22202 GACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCG 22261 ||| | || || | ||| | ||||| | || || |||| ||||||| Sbjct 34272 CTCGTGATCTTGCCCATGGTGGGCTCCTTCATGTGAATGTTCAAGCTCTGAGACTGATCG 34331 Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCATCGAC--ATTTCCCAT 22318 || || || || ||||| || ||||| | | ||||| | ||| ||| |||||||| Sbjct 34332 ATGAATGCACCACGATCAGCAGCCATTTGGA-CAATGGTTCGCT--GACTGATTTCCCAC 34388 Query 22319 ACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCC 22377 || |||||||||| | | ||| || || || | || || | | || | || || Sbjct 34389 ACAGTCTTGTACAATGCCTTGAGGTCATCTGGGAT-GTTTGGAATGCGTTGAATAGAGCC 34447 Query 22378 GTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATC 22437 || | ||||| || || || | ||| ||| | ||| | || | || Sbjct 34448 ACCATCGGCAATGATGCGGTTCTTCATGTTCTCGGACCAGAGACCACGGTCGACGAGGTC 34507 Query 22438 TTTGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAA 22495 |||| || ||| |||| || || || ||||| || | ||| || ||||| |||| Sbjct 34508 CTTGAGGAGCCATG--GGTTGACAACCTGGAACTCACCAGCCAACACCCGGCGAGAGTAA 34565 Query 22496 ATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCG 22555 |||||| ||| | || ||||| | || ||| |||| || |||| || ||||| Sbjct 34566 ATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATTTGAGAAGTGGAAGCA 34625 Query 22556 GTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTG 22615 || ||||| || |||| || || ||||| | || ||||||| | || | |||| Sbjct 34626 GTTGGCATTGGGGCCACGAGAAGGGAGTTGCGCACCCCGTGCTCAGCGATCCTGGCCTTG 34685 Query 22616 AGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAA- 22674 || | ||||||||| ||||| | || || ||| |||||||||||||||| | Sbjct 34686 AGAGCAGCCCAGTCCCAGAGATCAGTTGGAGTGACAC---CCCACATATCGTATTGAAGT 34742 Query 22675 -CACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAA 22733 ||| | ||| | || |||||||||||| ||||| || ||| | || | || | Sbjct 34743 TCACCCTTTGACACT--GGTGAGCCTTCGTACGTCTCGTATGGGCCAAGTTTCTCAGCCA 34800 Query 22734 GTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAAT- 22792 | || ||| ||| ||| ||| | | || || ||||| ||||| | ||| | | Sbjct 34801 GCTCACAGGACGCAGTCAAGGCGGCATGGTAAATGGTCTCAAAGATCTGGACGTTGAGTC 34860 Query 22793 TCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCC 22852 | | | | || | | || | ||||| || | | ||| || || || | |||| Sbjct 34861 TACGTGCCTCCGGAGAGT-CGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGACCC 34919 Query 22853 TGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTT--TTGCCTCGGGCAAAG 22910 || || || | |||||| || |||| | || | ||| | ||||| |||| || Sbjct 34920 TGGACACCAAGACCGATGGGGCGGTGACGGAAGTTG--CTCTTCCTCGCCTCTGGCACAG 34977 Query 22911 GATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNN 22970 |||| || ||||| || |||||||||| ||||| || | || | Sbjct 34978 GATAGTGGTTGATCTCGATGGTCTTGTTCAAGTTCCTGGTGACGACTTGAACGACTTCGT 35037 Query 22971 NNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAA---CAAACT-TGTTG--ACGGCGA 23024 | |||||||| | || || | ||| ||| | ||||| | |||| Sbjct 35038 GAAGCTTCTTGAAGTCGTAGGT-CTCG-TTCT-CAATGTCAACGTATGTTGGGAGAGCGA 35094 Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTAC 23084 |||| || || ||||| || || ||||| ||| | | |||||| | || || || | Sbjct 35095 TCGAAGCCAGGTTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGTGC 35154 Query 23085 ATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAAT 23144 | || ||| | || ||||| | || |||||||||| || || ||||| | || Sbjct 35155 AGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCAT 35214 Query 23145 CCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||||||| || ||| | || ||| |||||| ||| | ||| | ||| || ||| | Sbjct 35215 CCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAA 35274 Query 23205 TAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAAC 23263 | |||| ||| | ||| ||| |||| | | ||||| | |||||||| | ||| | | Sbjct 35275 TCTTCTGTGCGCGGACA-GTCTCACGGCCACGGCCTTGCTTCTCGTACTGCTCGTAAAGC 35333 Query 23264 GCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAG 23322 || || || | ||||| ||| ||||| || || || | | | || |||||||| Sbjct 35334 TTTTCGAACTCCTCGCCGTAGACA-TCGGCGAGACCAGGGCACTCATTGGGGCACATGAG 35392 Query 23323 ACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 |||| || | ||||| || |||| || ||||| || ||||| || ||| | Sbjct 35393 GGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCGAA 35452 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAA--TCCAAAAAG 23440 ||| || || || ||||| || || || |||||| || | |||| | | |||| ||| Sbjct 35453 GAAAAGGTCACGAGCGCGGACTTCTTCCTTGCCG-TGAT-TTTTGCGGAGGTCCATGAAG 35510 Query 23441 TCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTG 23500 |||| || || || ||||| ||||||||||| | |||||| || || || | ||||||| Sbjct 35511 GCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTG 35570 Query 23501 CCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCG 23560 || ||||| || ||||| || || ||||||||||| || | ||||| || || || ||| Sbjct 35571 CCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCCG 35630 Query 23561 TTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGG 23620 ||||| | |||| ||| | | | ||| || | || || | | ||| |||| | Sbjct 35631 TTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCGGTGGACGTTG 35690 Query 23621 AAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATG 23680 | ||| |||||||| | || || ||||| || || || |||||||||||||| Sbjct 35691 AGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATA 35750 Query 23681 CCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGC 23740 |||||||||||||| || || | ||||||| || || || | | || || || ||| Sbjct 35751 CCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCATTAGGC 35810 Query 23741 GTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATT 23799 ||| | || ||| || || || ||||| || ||||| || ||||| ||| || Sbjct 35811 GTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACATGTAG-TT 35869 Query 23800 GTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCAT 23859 ||| || || || ||||| ||||| ||||| ||||| || || | || || ||||| || Sbjct 35870 GTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACACGCATGAT 35929 Query 23860 CATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTG 23916 ||| | || |||| || | ||| | ||||| ||| || || || || || | Sbjct 35930 CATCTGCTGTGGTCGCTCTGCAACCTT---GCCGTCAATGCGGAGGAGGTACGATCGCTC 35986 Query 23917 CATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | || || || ||||| || | ||||| |||||||| |||| || ||||| ||||| Sbjct 35987 TAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCTGAATT 36046 >seq1950 Length=170036 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || || || || |||||| |||| ||||| | || Sbjct 63252 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCA 63311 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| || | || ||||||||| Sbjct 63312 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCCGACCAG 63371 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| || | || || || || |||||| ||| Sbjct 63372 CAGCGCTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGTCCGATTACAAC 63431 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || ||||| || || || ||| | || | || |||| Sbjct 63432 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTTCGTCTCCGTGGTGGTA 63480 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT-----GAAC 31247 ||||| || ||||| ||||| || || ||||| || ||||| | || || ||| Sbjct 63480 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTGAAGTGGAAT 63539 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || |||| |||| | ||||| || || |||||||| ||| | || || | Sbjct 63540 CATCAGACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAG 63599 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || |||||||| || ||| | || ||| ||| ||||||| | Sbjct 63600 ACCAGCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGGACACTGAGCGACT 63659 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || || ||||| || |||| ||| | ||| | || || Sbjct 63660 ACAACATCCAGAAGGAGAGCACTCTGCACTTGGTGCTTCGTCTGCGTGGTGG 63711 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274 |||| ||||| || |||||| |||| ||||| | ||||||| | |||| | || || Sbjct 63046 TGACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAA-- 63103 Query 31275 AGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTG 31331 ||| || | | ||||||||| || | || || || ||||||||||| || ||||| | Sbjct 63104 -GAGCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCG 63162 Query 31332 GCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTC 31391 |||| || | || ||| ||| | ||||| || ||||| || || || |||| Sbjct 63163 GCAAGCAACTCGAGGACGGCCGCACTCTTTCTGATTACAATATTCAGAAGGAGTCCACTC 63222 Query 31392 TTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || || || || | ||| | || |||| Sbjct 63223 TCCACCTTGTCCTCCGCCTGCGTGGTGGTA 63252 >seq1821 Length=46945 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| | || || || | ||||||| || Sbjct 19120 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACAATC 19179 Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 || | ||||| ||| || | | ||||||||| || | || || || ||||||||| Sbjct 19180 GACAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGATCAGCAGCGT 19236 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || || |||||||| || |||||||| || Sbjct 19237 CTGATCTTCGCTGGAAAGCAGTTGGAGGA 19265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445751767717920