Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2106 91.5 3e-13 >seq2106 Length=142898 Score = 91.5 bits (100), Expect = 3e-13 Identities = 278/433 (64%), Gaps = 35/433 (8%) Strand=Plus/Plus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 || || ||||| || || || |||||||| ||| | ||||| ||||| |||||| | Sbjct 23620 GCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTG 23679 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||||| | ||| | || | |||||||| | ||| || || || || || | ||||| Sbjct 23680 AAGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAG 23739 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100 || | || ||||| || ||| ||||||| | || | ||| Sbjct 23740 GGCATGCACACAGACTTCGCGTGCCTGCTGTTC-----------------TCCCACCTCA 23782 Query 102101 AGAGAAAGG----------ATTCTTGAA----ATTGTCACTGAAGCCGTCCGAATTGAAC 102146 ||| ||| | || || | || || || || ||| |||||| | Sbjct 23783 AGAACAAGCCGGACGCATCACTCGTGCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGC 23842 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 ||||||| ||||||| | | || || || | | | || ||||| |||| | ||| Sbjct 23843 AAGAATTCCTCACAGATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGT 23902 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCA 102264 |||||||||| || ||||| ||||| || ||| | | | | || || |||| | Sbjct 23903 GCCAGTACATCGAGTTTGTCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAA--GTT 23960 Query 102265 CTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAA 102324 ||| || | |||||||| ||| |||||||| || ||||| || | |||||||| Sbjct 23961 CTACAACGCCACCAACCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAA 24020 Query 102325 CTTTTTTGAAAAG 102337 |||||| || ||| Sbjct 24021 CTTTTTCGAGAAG 24033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989550704827830