Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 91.5 3e-13
>seq2106
Length=142898
Score = 91.5 bits (100), Expect = 3e-13
Identities = 278/433 (64%), Gaps = 35/433 (8%)
Strand=Plus/Plus
Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980
|| || ||||| || || || |||||||| ||| | ||||| ||||| |||||| |
Sbjct 23620 GCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTG 23679
Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040
||||| | ||| | || | |||||||| | ||| || || || || || | |||||
Sbjct 23680 AAGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAG 23739
Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100
|| | || ||||| || ||| ||||||| | || | |||
Sbjct 23740 GGCATGCACACAGACTTCGCGTGCCTGCTGTTC-----------------TCCCACCTCA 23782
Query 102101 AGAGAAAGG----------ATTCTTGAA----ATTGTCACTGAAGCCGTCCGAATTGAAC 102146
||| ||| | || || | || || || || ||| |||||| |
Sbjct 23783 AGAACAAGCCGGACGCATCACTCGTGCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGC 23842
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
||||||| ||||||| | | || || || | | | || ||||| |||| | |||
Sbjct 23843 AAGAATTCCTCACAGATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGT 23902
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCA 102264
|||||||||| || ||||| ||||| || ||| | | | | || || |||| |
Sbjct 23903 GCCAGTACATCGAGTTTGTCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAA--GTT 23960
Query 102265 CTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAA 102324
||| || | |||||||| ||| |||||||| || ||||| || | ||||||||
Sbjct 23961 CTACAACGCCACCAACCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAA 24020
Query 102325 CTTTTTTGAAAAG 102337
|||||| || |||
Sbjct 24021 CTTTTTCGAGAAG 24033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989550704827830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |