Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 136 4e-27
>seq2106
Length=142898
Score = 136 bits (150), Expect = 4e-27
Identities = 360/538 (67%), Gaps = 19/538 (4%)
Strand=Plus/Plus
Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591
||||||| | || || | || ||| | || || |||| ||| ||||||||| |||||
Sbjct 23522 TCAACGCCATCGATAACATCCCATGTATCCGTAAGAAGGCTGACTGGGCATTGCGATGGA 23581
Query 52592 TCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTG 52651
|| || | || | || |||||| || ||| |||| || ||| || || |||
Sbjct 23582 TCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATCGCTTTCGCTGCTGTCGAGGGTA 23641
Query 52652 TGtttttttC-GGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCC 52709
| || || || |||| ||| ||| | || || | | || || | ||| | | ||| |
Sbjct 23642 TCTTCTTCTCTGGGTCGTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTC-TCATGGC 23699
Query 52710 CGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGC 52769
||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||| || ||
Sbjct 23700 CGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGGCATGCACACAGACTTCGC 23759
Query 52770 GTGTTTG-TATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCT--AGA 52826
||| || | || | || | ||||| || | | | | | | | | |||
Sbjct 23760 GTGCCTGCTGTTCTCCCACC-----TCAAGAACAA--GCCGGACGCATCACTCGTGCAGA 23812
Query 52827 -CATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTAT 52885
||| | ||||| |||| ||||| |||| || | || || || | |||||
Sbjct 23813 GCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACAGATGCGCTCCCCGT-- 23870
Query 52886 CATTGT--TGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAG 52943
||| | | |||||||| || | | |||||| |||||||||||||||| || ||| |
Sbjct 23871 CATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAGACCG 23930
Query 52944 ACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTAT 53003
|||||| || ||||| | | ||| | ||| || || ||||| || || ||
Sbjct 23931 TCTGTTGTTGGCACTCGGCAACCAGAAGTTCTACAACGCCACCAACCCATTCGACTTCAT 23990
Query 53004 GAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
| | ||||| || || | ||||| || ||||||||||||| ||||| || || |||
Sbjct 23991 GGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGACTAC 24048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496047716699200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |