Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1950 86.0 5e-12 >seq1950 Length=170036 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| |||||| || | ||||||||||||| ||||| | || || | ||| ||||| Sbjct 63449 AGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCC 63390 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030 || || ||||| ||||| || |||| || | ||| || || || ||| ||| | Sbjct 63389 AGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTC-CTGAATCTTGGACT 63331 Query 43031 TGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAG 43090 |||| || ||| ||||| || ||| || || | || || || ||||| || || | Sbjct 63330 TGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGG 63271 Query 43091 TTTTCACAAAAATTTGCAT 43109 | || ||||| |||||||| Sbjct 63270 TCTTGACAAAGATTTGCAT 63252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381357394504308