Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 86.0 5e-12
>seq1950
Length=170036
Score = 86.0 bits (94), Expect = 5e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971
|||| |||||| || | ||||||||||||| ||||| | || || | ||| |||||
Sbjct 63449 AGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCC 63390
Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030
|| || ||||| ||||| || |||| || | ||| || || || ||| ||| |
Sbjct 63389 AGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTC-CTGAATCTTGGACT 63331
Query 43031 TGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAG 43090
|||| || ||| ||||| || ||| || || | || || || ||||| || || |
Sbjct 63330 TGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGG 63271
Query 43091 TTTTCACAAAAATTTGCAT 43109
| || ||||| ||||||||
Sbjct 63270 TCTTGACAAAGATTTGCAT 63252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381357394504308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |