Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq635 111 2e-19
>seq635
Length=74236
Score = 111 bits (122), Expect = 2e-19
Identities = 308/472 (65%), Gaps = 3/472 (1%)
Strand=Plus/Plus
Query 70787 TTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACA 70846
|||| | ||| | || |||||||| || | || || || | || || || |||||||
Sbjct 34171 TTTCTTGGTCGACAGTGAACTGAATTGGTGCCGAGGCAGCCATGGTTCGGAGGTAGTACA 34230
Query 70847 TGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGC 70906
|||| || || |||||||| |||| || || ||||| ||||| | ||| |
Sbjct 34231 TGCCAGTCTTGAGACCGAGCTTCCAGCCCGTGAAGTGCATGCTCGTGATCTTGCCCATGG 34290
Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966
| || || |||||||| |||| |||| ||||||||||| || || | || |
Sbjct 34291 TGGGCTCCTTCATGTGAATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAG 34350
Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026
||||||||| | || || || |||||||| | ||| || || | | ||| |
Sbjct 34351 CAGCCATTTGGACAATGGTTCGCTGACTGATTTCCCACACAGTCTTGTACAATGCCTTGA 34410
Query 71027 TATCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083
|| ||||| | ||||| | | ||||| || |||||||| ||||| || | || |
Sbjct 34411 GGTCATCTGGGATGTTTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCT 34470
Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143
| || | || ||| | | ||| | | | ||||| || || || |
Sbjct 34471 TCATGTTCTCGGACCAGAGACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGTTGACAA 34530
Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203
| || || || |||| ||| || | |||| |||||| || || || || || || |
Sbjct 34531 CCTGGAACTCACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAGC 34590
Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255
|||| || |||| ||||||| ||| || ||||| ||||| || |||||
Sbjct 34591 ACTCGTTGAAGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCAC 34642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671117169855760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |