Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2106 100 3e-16 >seq2106 Length=142898 Score = 100 bits (110), Expect = 3e-16 Identities = 245/363 (67%), Gaps = 15/363 (4%) Strand=Plus/Plus Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559 ||| |||| |||||||| ||||| ||||| ||||| ||||| || |||||||||||| Sbjct 23695 ATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGGCATGCACACAGAC 23754 Query 50560 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTG 50619 || ||||| || | | | | | | || ||| || | ||| | || | || Sbjct 23755 TTCGCGTGCCTGCTGTTCT---CCCACCTCAA-GAACAAGC--CGGACGCATCACTCGTG 23808 Query 50620 GA---CATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCC 50676 | ||| || || || |||| || || |||| || |||| || || | ||| Sbjct 23809 CAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACAGATGCGCTCCCC 23868 Query 50677 GTGGCATTGT--TGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAG 50734 || ||| | | |||||||| || | | |||||| ||||||| |||||||| |||| Sbjct 23869 GT--CATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAG 23926 Query 50735 ACAGATTGTTGTTGCAGCTGGGACAACC-GAAATACTATAATGCACGTAACCCCTTTCCG 50793 || | |||||||| || || ||||| ||| | ||| || || ||||| || Sbjct 23927 ACCGTCTGTTGTTGGCACTCGG-CAACCAGAAGTTCTACAACGCCACCAACCCATTCGAC 23985 Query 50794 TTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAA 50853 || ||| | ||||| || | | ||||| || ||||||||||| | ||||| || || Sbjct 23986 TTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGAC 24045 Query 50854 TAC 50856 ||| Sbjct 24046 TAC 24048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506997757252320