Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 100 3e-16
>seq2106
Length=142898
Score = 100 bits (110), Expect = 3e-16
Identities = 245/363 (67%), Gaps = 15/363 (4%)
Strand=Plus/Plus
Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559
||| |||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||||
Sbjct 23695 ATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGGCATGCACACAGAC 23754
Query 50560 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTG 50619
|| ||||| || | | | | | | || ||| || | ||| | || | ||
Sbjct 23755 TTCGCGTGCCTGCTGTTCT---CCCACCTCAA-GAACAAGC--CGGACGCATCACTCGTG 23808
Query 50620 GA---CATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCC 50676
| ||| || || || |||| || || |||| || |||| || || | |||
Sbjct 23809 CAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACAGATGCGCTCCCC 23868
Query 50677 GTGGCATTGT--TGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAG 50734
|| ||| | | |||||||| || | | |||||| ||||||| |||||||| ||||
Sbjct 23869 GT--CATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAG 23926
Query 50735 ACAGATTGTTGTTGCAGCTGGGACAACC-GAAATACTATAATGCACGTAACCCCTTTCCG 50793
|| | |||||||| || || ||||| ||| | ||| || || ||||| ||
Sbjct 23927 ACCGTCTGTTGTTGGCACTCGG-CAACCAGAAGTTCTACAACGCCACCAACCCATTCGAC 23985
Query 50794 TTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAA 50853
|| ||| | ||||| || | | ||||| || ||||||||||| | ||||| || ||
Sbjct 23986 TTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGAC 24045
Query 50854 TAC 50856
|||
Sbjct 24046 TAC 24048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506997757252320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |