Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2106 280 2e-70 seq635 168 1e-36 >seq2106 Length=142898 Score = 280 bits (310), Expect = 2e-70 Identities = 577/844 (68%), Gaps = 23/844 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| || ||| | || ||||| ||||| | || ||| | |||||| Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | | |||| || |||||| | || || || Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 ||| | | || ||||| |||| || |||||||| |||||||| || ||| |||| || Sbjct 23326 CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAG-CG 23384 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| || | || || || | ||||| ||||||||||| |||||||| Sbjct 23385 TTTCAGCAGTGAAGTACAGATACCTGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 23444 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314 |||||| | |||||||||| ||||| || || |||| ||||| |||| || Sbjct 23445 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 23504 Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 ||| || | || || ||||| ||||| ||||| | | || | ||| ||||| ||||| Sbjct 23505 GCAGCG--ATCATAT-CTCTTCAACGCCATCGATAACATCCCATGTATCCGTAAGAAGGC 23561 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | | |||| | || |||||| |||| | || || | | ||| | ||||| | || Sbjct 23562 TGACTGGGCATTGCGATGGATCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATCGC 23621 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTC-GGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 ||||| || || ||||| |||||||| || |||| | || ||| ||||||| ||| | | Sbjct 23622 TTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCG-TTCGCGTCCATCTTCTGGTTGA 23680 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || |||||| |||| || ||| | ||||| || || || || ||||||| Sbjct 23681 AGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGG 23740 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCAG 125611 || | ||| ||||| || || ||||| || || || | | ||| || Sbjct 23741 GCATGCACACAGACTTCGCGTGCCTGCTGTTCTCCCACCTCAAGAACAAGCCGGACGC-- 23798 Query 125612 ATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTT 125671 ||| || || | || ||||| | | ||| || || || || ||||| || Sbjct 23799 ATCACTCG-TGCAGAG--CATCATCGT------CGAGGCTGTCGCAATTGAGCAAGAATT 23849 Query 125672 TCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731 || || || | || || |||| | | |||||||| |||||| |||||| |||| Sbjct 23850 CCTCACAGATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTA 23909 Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGC 125791 ||| |||||||| ||||| ||||| ||| | | || ||| | |||||||| Sbjct 23910 CATCGAGTTTGTCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAAGTTCTACAACGC 23969 Query 125792 CAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGA 125851 || || || || || |||||| | ||| || || | || ||||||||||||||||| Sbjct 23970 CACCAACCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGA 24029 Query 125852 GAAG 125855 |||| Sbjct 24030 GAAG 24033 >seq635 Length=74236 Score = 168 bits (186), Expect = 1e-36 Identities = 387/572 (68%), Gaps = 13/572 (2%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||||| ||| || || || || |||||| | | ||||| || || | || Sbjct 35647 ACGAACGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTG-CTCG 35589 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 |||||| ||||| |||||||| || || || ||| | ||| ||||| | || || || Sbjct 35588 CTACGTTGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATG 35529 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| || || || | ||| || || | |||||||| ||| ||||| | || Sbjct 35528 GCACGCTGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCAAGGAAGAAGTCCG 35469 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | ||| | || | ||||| ||| | |||||| ||||||||||||| || | || Sbjct 35468 CGCTCGTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGA 35409 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| | |||| ||| ||||||||| | || || ||||| ||||| || || Sbjct 35408 GAACGGCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGG 35349 Query 97106 CGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGAC 97161 ||| ||||| || ||| ||| | |||||| | | ||||| |||||||| Sbjct 35348 CGAGGAGTTCGA---AAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCGTGAGAC 35292 Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220 ||| |||| |||| | ||| | |||||| | ||||||| |||||||| Sbjct 35291 -TGTCCGCGCAC-AGAAGATTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGCGGC 35234 Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280 || | ||| || ||||||||| | || ||||| |||||||| || | ||||| Sbjct 35233 CCTTTCATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACA 35174 Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCA 97340 ||| ||||||| || ||||| || || | |||||| || |||| || ||| || Sbjct 35173 ATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATGAGGTCGCT 35114 Query 97341 GTTTGCGTTCTGGCATCGGTCAATCTGCCCAA 97372 || ||| ||||| ||| || ||| ||||| Sbjct 35113 GTCTGCAACCTGGCTTCGATCGCTCT-CCCAA 35083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741034874731760