Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 280 2e-70
seq635 168 1e-36
>seq2106
Length=142898
Score = 280 bits (310), Expect = 2e-70
Identities = 577/844 (68%), Gaps = 23/844 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| || ||| | || ||||| ||||| | || ||| | ||||||
Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | | |||| || |||||| | || || ||
Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197
||| | | || ||||| |||| || |||||||| |||||||| || ||| |||| ||
Sbjct 23326 CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAG-CG 23384
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| || | || || || | ||||| ||||||||||| ||||||||
Sbjct 23385 TTTCAGCAGTGAAGTACAGATACCTGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 23444
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314
|||||| | |||||||||| ||||| || || |||| ||||| |||| ||
Sbjct 23445 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 23504
Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
||| || | || || ||||| ||||| ||||| | | || | ||| ||||| |||||
Sbjct 23505 GCAGCG--ATCATAT-CTCTTCAACGCCATCGATAACATCCCATGTATCCGTAAGAAGGC 23561
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| | |||| | || |||||| |||| | || || | | ||| | ||||| | ||
Sbjct 23562 TGACTGGGCATTGCGATGGATCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATCGC 23621
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTC-GGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
||||| || || ||||| |||||||| || |||| | || ||| ||||||| ||| | |
Sbjct 23622 TTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCG-TTCGCGTCCATCTTCTGGTTGA 23680
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
||||||| || |||||| |||| || ||| | ||||| || || || || |||||||
Sbjct 23681 AGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGG 23740
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCAG 125611
|| | ||| ||||| || || ||||| || || || | | ||| ||
Sbjct 23741 GCATGCACACAGACTTCGCGTGCCTGCTGTTCTCCCACCTCAAGAACAAGCCGGACGC-- 23798
Query 125612 ATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTT 125671
||| || || | || ||||| | | ||| || || || || ||||| ||
Sbjct 23799 ATCACTCG-TGCAGAG--CATCATCGT------CGAGGCTGTCGCAATTGAGCAAGAATT 23849
Query 125672 TCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731
|| || || | || || |||| | | |||||||| |||||| |||||| ||||
Sbjct 23850 CCTCACAGATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTA 23909
Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGC 125791
||| |||||||| ||||| ||||| ||| | | || ||| | ||||||||
Sbjct 23910 CATCGAGTTTGTCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAAGTTCTACAACGC 23969
Query 125792 CAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGA 125851
|| || || || || |||||| | ||| || || | || |||||||||||||||||
Sbjct 23970 CACCAACCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGA 24029
Query 125852 GAAG 125855
||||
Sbjct 24030 GAAG 24033
>seq635
Length=74236
Score = 168 bits (186), Expect = 1e-36
Identities = 387/572 (68%), Gaps = 13/572 (2%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||||| ||| || || || || |||||| | | ||||| || || | ||
Sbjct 35647 ACGAACGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTG-CTCG 35589
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| |||||||| || || || ||| | ||| ||||| | || || ||
Sbjct 35588 CTACGTTGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATG 35529
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| || || || | ||| || || | |||||||| ||| ||||| | ||
Sbjct 35528 GCACGCTGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCAAGGAAGAAGTCCG 35469
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | ||| | || | ||||| ||| | |||||| ||||||||||||| || | ||
Sbjct 35468 CGCTCGTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGA 35409
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| | |||| ||| ||||||||| | || || ||||| ||||| || ||
Sbjct 35408 GAACGGCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGG 35349
Query 97106 CGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGAC 97161
||| ||||| || ||| ||| | |||||| | | ||||| ||||||||
Sbjct 35348 CGAGGAGTTCGA---AAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCGTGAGAC 35292
Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220
||| |||| |||| | ||| | |||||| | ||||||| ||||||||
Sbjct 35291 -TGTCCGCGCAC-AGAAGATTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGCGGC 35234
Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280
|| | ||| || ||||||||| | || ||||| |||||||| || | |||||
Sbjct 35233 CCTTTCATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACA 35174
Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCA 97340
||| ||||||| || ||||| || || | |||||| || |||| || ||| ||
Sbjct 35173 ATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATGAGGTCGCT 35114
Query 97341 GTTTGCGTTCTGGCATCGGTCAATCTGCCCAA 97372
|| ||| ||||| ||| || ||| |||||
Sbjct 35113 GTCTGCAACCTGGCTTCGATCGCTCT-CCCAA 35083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741034874731760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |