Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1950 98.7 7e-16 >seq1950 Length=170036 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || ||||| || || || |||||||||||| || | | | || || | ||| Sbjct 63454 TGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGC 63395 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||||||| | ||||| || || |||||| |||||| || || ||||| ||| ||| Sbjct 63394 TTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGAATCTTG 63335 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| || | || || || | ||| ||||| || || || Sbjct 63334 GACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTG 63275 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||||||| Sbjct 63274 AGGGTCTTGACAAAGATTTGCATA 63251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362167608681066