Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1557 113 7e-21 >seq1557 Length=266658 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| ||||| | || || |||||||| || ||||| ||||||||||| Sbjct 62243 GCCAAGCGTCATCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACAAAGCCAGCTAT 62185 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 62184 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 62144 Score = 91.5 bits (100), Expect = 2e-14 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||| | |||| ||||||| || ||||||| || | Sbjct 62082 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGCGACG 62023 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| ||||| || | ||| | ||||| | Sbjct 62022 CAGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACTTCTCTCGATGTTGTCTACG 61963 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 || | || || |||||||| | | || ||||| || |||| Sbjct 61962 CACTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGGTGGTTA 61920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072799029818