Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1557 113 7e-21
>seq1557
Length=266658
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||||| | || || |||||||| || ||||| |||||||||||
Sbjct 62243 GCCAAGCGTCATCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACAAAGCCAGCTAT 62185
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 62184 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 62144
Score = 91.5 bits (100), Expect = 2e-14
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | |||| ||||||| || ||||||| || |
Sbjct 62082 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGCGACG 62023
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||| || | ||| | ||||| |
Sbjct 62022 CAGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACTTCTCTCGATGTTGTCTACG 61963
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|| | || || |||||||| | | || ||||| || ||||
Sbjct 61962 CACTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGGTGGTTA 61920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072799029818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |