Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq635 396 7e-105 >seq635 Length=74236 Score = 396 bits (438), Expect = 7e-105 Identities = 1153/1738 (66%), Gaps = 52/1738 (3%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || || ||||| ||| | |||||||| ||| |||| ||||| | |||| |||| Sbjct 35947 GAGCGACCACAGCAGATGATCATGCGTGTGGCTGTTGGCATCCACGGTGAGGATATTGAG 35888 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAA 363565 ||||| ||||| || || || || | | || | | ||| ||||| ||||| |||| | Sbjct 35887 GCCGCTATTGAGACCTACAA-CTAC-ATGTCCAACAAGTACTTCACACACGCTTCGCCCA 35830 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | || ||||| || | |||| | ||| | | || |||||| | | | |||| Sbjct 35829 CGCTTTTCAGCGCTGGTACGCCTAATGCTCAGCTCGCCTCATGCTTTTTGGTCGACATGA 35770 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || |||||||||||||| ||||| || |||| |||||| | || || |||| Sbjct 35769 AGGATGACAGCATCGAGGGTATCTACGACACTCTCAAGACTTGTGCCATGATCTCAAAGA 35710 Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 | ||||| || |||||| | | || ||||| | || || || | || | || | Sbjct 35709 ACGCAGGAGGCATTGGTCTCAACG-TCCACCGCATCCGCGCGACTGGCTCGT-ATATCGG 35652 Query 363744 CGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 ||||| | || | | || || || |||||||||||||| ||||| | |||| |||| Sbjct 35651 AGGCACGAACGGCACA-TCCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTG 35593 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | ||||| ||||||||||| |||||| || || ||||| || || ||||||| Sbjct 35592 CTCGCTACGTTGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGC 35533 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGAA 363921 | || || ||| | || | || | || ||||| ||||| ||||| || || ||| Sbjct 35532 CATGGCACGCTGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCAAG-GAAGAA 35474 Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981 | || || ||||| || |||| ||||||||| | | || | || |||||||| || Sbjct 35473 GTCCGCGCTCGTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTT 35414 Query 363982 GAGGCAGGTAA----GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 |||| || || |||| || | ||| | ||||| | || || || ||||| |||| Sbjct 35413 GAGG-AG--AACGGCGAAT-GGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGA 35358 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 ||| | || || || | | || ||||| |||| || | | || | || Sbjct 35357 TGTCTACGGCGAGGAGTTCGAAAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCG 35298 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | |||| | | |||||||||| | |||| |||||| | || | |||| ||||| || Sbjct 35297 TGAGACTGTCCGCGCACAGAAGATTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGG 35238 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 || | || ||||||| ||| | |||||||||||| ||||||| || ||||||| Sbjct 35237 CGGCCCTTTCATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGG 35178 Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 |||| || |||| |||||| || || ||||| ||||| ||| ||||||| || ||| Sbjct 35177 CACAA-TCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATGAGG 35119 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT---TTG---TAAAAGATGGTA 364330 || || || ||||| || |||||||| || || | | ||| | | | | | Sbjct 35118 TCGCTGTCTGCAACCTGGCTTCGATCGCTCTCCCAACATACGTTGACATTGAGAACGAGA 35059 Query 364331 CTTTTGACCACCAGCATCTTTATGACGTAACCTATCA---TGCTACTTGCAATCTCGACA 364387 | | ||| | || | ||| | || || | ||| | || | || | ||| Sbjct 35058 CCTACGACTTCAAGAAGCTTCACGAAGT---CGTTCAAGTCGTCACCAGGAACTTGAACA 35002 Query 364388 AGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG--CGTTCTAATATGCGTCA 364445 || ||||| | || | ||||| | || | || |||| | | || | ||||| Sbjct 35001 AGACCATCGAGATCAACCACTATCCTGTGCCAG-AGGCGAGGAAGAGC-AACTTCCGTCA 34944 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATG 364503 ||||| || ||||||||||| ||||| |||||||| | || | ||||| ||| Sbjct 34943 CCGCCCCATCGGTCTTGGTGTCCAGGGTCTCGCTGATGCCTTCCT--TGCTCTTCGCATG 34886 Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563 | || || || || || || ||| || || |||||||||| || || || | Sbjct 34885 CCCTTCGACTCTCCGGAGGCACGTAGACTCAACGTCCAGATCTTTGAGACCATTTACCAT 34826 Query 364564 GCCGCAATGACTGCTTCGTGTGATTTGGC-AAAAACCAAGGGAAAGTACTCTACTTATGA 364622 ||||| ||||||| || ||||| |||| | || | || | ||| || || || Sbjct 34825 GCCGCCTTGACTGCGTCCTGTGAGCTGGCTGAGAAACTTGGCCCA-TACGAGACGTACGA 34767 Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682 || || || | || |||| || | || | ||| | ||| |||||| ||| ||| Sbjct 34766 AGGCTCACCAGTGTCAAAGGGTGAACTTCAATACGATATGTGGGGTGTCACTCCAACTGA 34707 Query 364683 CCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCT 364742 | ||| |||||| | | || ||| | |||| || ||||||||||| Sbjct 34706 TCTCTGGGACTGGGCTGCTCTCAAGGCCAGGATCGCTGAGCACGGGGTGCGCAACTCCCT 34647 Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802 | || || ||||| || ||||| ||| | || ||| | || |||||||||||| Sbjct 34646 TCTCGTGGCCCCAATGCCAACTGCTTCCACTTCTCAAATCATGGGCTTCAACGAGTGCTT 34587 Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862 ||| || | || ||||| |||| || |||||||| | | || || || | ||| || Sbjct 34586 CGAGCCATACACTAGCAACATTTACTCTCGCCGGGTGTTGGCTGGTGAGTTCCAGGTTGT 34527 Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922 || | || ||||||| || |||||| || || ||| || | ||||||||| Sbjct 34526 CAACCCATGGCTCCTCAAGGACCTCGTCGACCGTGGTCTCTGGTCCGAGAACATGAAGAA 34467 Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982 | ||||| |||| | ||| ||| | || ||||||| | ||||| || || || Sbjct 34466 CCGCATCATTGCCGATGGTGGCTCTATTCAACGCATTCCAAACATCCCAGATGACCTCAA 34407 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGC 365039 | | | ||||| || || |||||||| |||||| ||||| | ||||| || Sbjct 34406 GGCATTGTACAAGACTGTGTGGGAAATCAGTCAGCGAAC---CATTGTCCAAATGGCTGC 34350 Query 365040 CGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAAC 365099 ||||| ||||| || ||| |||| ||| || ||| | ||||| |||| || Sbjct 34349 TGATCGTGGTGCATTCATCGATCAGTCTCAGAGCTTGAACATTCACATGAAGGAGCCCAC 34290 Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTAAGACAGG 365156 | | |||| | || |||||| ||| ||||| ||||| |||||| ||||| || Sbjct 34289 CATGGGCAAGATCACGAGCATGCACTTC-ACGGGCTGGAAGCTCGGTCTCAAGACTGG 34233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303309747853532