Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq635 95.1 1e-14 seq1950 89.7 4e-13 seq2106 82.4 7e-11 >seq635 Length=74236 Score = 95.1 bits (104), Expect = 1e-14 Identities = 183/265 (69%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 133367 ACGTTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTA 133426 ||||| || || || || ||| ||| || || |||||||||||| |||||||| | Sbjct 35685 ACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCG 35744 Query 133427 TAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGGC 133486 ||||| || | ||||||||| |||| |||| || |||| | || || | | |||| || Sbjct 35745 TAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGA-GC 35803 Query 133487 ATT-TTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAACAGCTTTGATCG-CA 133544 ||| | | |||| || | ||||| |||||| || || | ||| | | || Sbjct 35804 ATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTAC-TTGTTGGACA 35862 Query 133545 TCAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACAC 133604 | | |||||| |||||| ||| ||||| || ||||| || || | || |||| Sbjct 35863 TGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACAC 35922 Query 133605 GCATCAGCATATGTTGAGGTCGCTC 133629 |||| | ||| || || |||||||| Sbjct 35923 GCATGATCATCTGCTGTGGTCGCTC 35947 >seq1950 Length=170036 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | |||||||| | || ||| |||| || ||| | Sbjct 63252 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCA 63311 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| ||||| || || || || ||||| || Sbjct 63312 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCCGACCAG 63371 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||||||||| |||| | | | | | |||||| ||| Sbjct 63372 CAGCGCTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGTCCGATTACAAC 63431 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 63432 ATCCAGAAGGAGTCCAC 63448 >seq2106 Length=142898 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || || ||||| || |||||||| | |||||||| || | ||| Sbjct 24048 GTAGTCACCAACACGCTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCAT 23989 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | | || | || ||| || | | |||||| || Sbjct 23988 GAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGTGCCAACAACAGACG 23929 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAG 104762 || || ||||| |||||||||| |||||| || || ||||||||||| || Sbjct 23928 GTCTGCGACAAACTCGATGTACTGGCACATGAGCTTG-GCATTCATGCCGAG 23878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429922240167030