Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq635 95.1 1e-14
seq1950 89.7 4e-13
seq2106 82.4 7e-11
>seq635
Length=74236
Score = 95.1 bits (104), Expect = 1e-14
Identities = 183/265 (69%), Gaps = 4/265 (2%)
Strand=Plus/Plus
Query 133367 ACGTTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTA 133426
||||| || || || || ||| ||| || || |||||||||||| |||||||| |
Sbjct 35685 ACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCG 35744
Query 133427 TAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGGC 133486
||||| || | ||||||||| |||| |||| || |||| | || || | | |||| ||
Sbjct 35745 TAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGA-GC 35803
Query 133487 ATT-TTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAACAGCTTTGATCG-CA 133544
||| | | |||| || | ||||| |||||| || || | ||| | | ||
Sbjct 35804 ATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTAC-TTGTTGGACA 35862
Query 133545 TCAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACAC 133604
| | |||||| |||||| ||| ||||| || ||||| || || | || ||||
Sbjct 35863 TGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACAC 35922
Query 133605 GCATCAGCATATGTTGAGGTCGCTC 133629
|||| | ||| || || ||||||||
Sbjct 35923 GCATGATCATCTGCTGTGGTCGCTC 35947
>seq1950
Length=170036
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || | |||||||| | || ||| |||| || ||| |
Sbjct 63252 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCA 63311
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | ||||| |||||| ||||| || || || || ||||| ||
Sbjct 63312 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCCGACCAG 63371
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | |||| | || |||||||||||||| |||| | | | | | |||||| |||
Sbjct 63372 CAGCGCTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGTCCGATTACAAC 63431
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || || || ||
Sbjct 63432 ATCCAGAAGGAGTCCAC 63448
>seq2106
Length=142898
Score = 82.4 bits (90), Expect = 7e-11
Identities = 123/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651
||| || || || || || || ||||| || |||||||| | |||||||| || | |||
Sbjct 24048 GTAGTCACCAACACGCTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCAT 23989
Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711
|| ||||| || || | || | | || | || ||| || | | |||||| ||
Sbjct 23988 GAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGTGCCAACAACAGACG 23929
Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAG 104762
|| || ||||| |||||||||| |||||| || || ||||||||||| ||
Sbjct 23928 GTCTGCGACAAACTCGATGTACTGGCACATGAGCTTG-GCATTCATGCCGAG 23878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429922240167030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |