Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1950 82.4 6e-11 >seq1950 Length=170036 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || || ||||| || | | || | ||||||| | ||| Sbjct 63226 TGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGTTGC 63167 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTG 16851 ||||| || |||| || ||||| || ||| ||| | ||||| |||| | | | ||| Sbjct 63166 TTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTG 63107 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 || |||||| | | | | ||||||| || ||| || | ||||||||| || ||||| Sbjct 63106 CT-CTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 63048 Query 16912 CA 16913 || Sbjct 63047 CA 63046 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| ||||||||||| || |||||||| |||| || ||| | | ||||| | ||| Sbjct 63454 TGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGC 63395 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || | ||||| ||||| || | ||||| ||||| ||| | Sbjct 63394 TTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGAATCTTG 63335 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | ||| || | ||||||||| ||||| || Sbjct 63334 GACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTG 63275 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| || ||||| Sbjct 63274 AGGGTCTTGACAAAGATTTGCAT 63252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405075035411740