Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 82.4 6e-11
>seq1950
Length=170036
Score = 82.4 bits (90), Expect = 6e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || || ||||| || | | || | ||||||| | |||
Sbjct 63226 TGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGTTGC 63167
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTG 16851
||||| || |||| || ||||| || ||| ||| | ||||| |||| | | | |||
Sbjct 63166 TTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTG 63107
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
|| |||||| | | | | ||||||| || ||| || | ||||||||| || |||||
Sbjct 63106 CT-CTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 63048
Query 16912 CA 16913
||
Sbjct 63047 CA 63046
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || |||||||| |||| || ||| | | ||||| | |||
Sbjct 63454 TGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGC 63395
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || | ||||| ||||| || | ||||| ||||| ||| |
Sbjct 63394 TTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGAATCTTG 63335
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | ||||| | ||| || | ||||||||| ||||| ||
Sbjct 63334 GACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTG 63275
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || |||||||| || |||||
Sbjct 63274 AGGGTCTTGACAAAGATTTGCAT 63252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405075035411740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |