Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 161 1e-34
>seq2106
Length=142898
Score = 161 bits (178), Expect = 1e-34
Identities = 378/563 (67%), Gaps = 13/563 (2%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
|||||| ||||| || || | || ||||| || || ||||| || || ||| || |
Sbjct 23763 GCACGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAG 23704
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| | | || || || ||||| | ||| || || || || || ||||| || ||
Sbjct 23703 ACCGGCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAACGACCCAGAGAAGAA 23644
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || || || || | | || |||||| | | |||| ||
Sbjct 23643 GATACCCTCGACAGCAGCGAAAGCGATCAGTCGGCAGGCAAAGGTCG---AATTCTTGTC 23587
Query 93271 ---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAG 93326
||||||| || ||||| || || || || ||||| || | |||| ||||| |
Sbjct 23586 AGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGA-TGTTATCGATGG 23528
Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386
|||| || || || ||||| | | || | ||||| || ||||| | ||| || |
Sbjct 23527 CGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGT 23468
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
| |||| || |||| |||||||| || |||||||||||||| |||| ||||| |
Sbjct 23467 ATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCAG 23408
Query 93447 TGATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505
||||| ||||| || ||| | ||| || || || || ||||| || ||||| |||
Sbjct 23407 GTATCTGTACTTCACTGCTGAAA-CGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAT 23349
Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTA 93562
|| || || ||||| | | || || || | | ||| ||||| || | |||
Sbjct 23348 GCGGCGAAGAAAGCAAGGACGTGTGAGATGAAGTATCGCTCGTCATCGTTCAATCTCTTG 23289
Query 93563 TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCT 93622
| ||| ||| || || || || ||||| | || || ||||||| || || |||||
Sbjct 23288 TTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCAGTCCAGAAGGACGCTTCA 23229
Query 93623 GCTTTTTTGTACATATCCCATAT 93645
||||| |||||||| | ||||||
Sbjct 23228 GCTTTCTTGTACATCTGCCATAT 23206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556842521044240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |