Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2106 161 1e-34 >seq2106 Length=142898 Score = 161 bits (178), Expect = 1e-34 Identities = 378/563 (67%), Gaps = 13/563 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 |||||| ||||| || || | || ||||| || || ||||| || || ||| || | Sbjct 23763 GCACGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAG 23704 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| | | || || || ||||| | ||| || || || || || ||||| || || Sbjct 23703 ACCGGCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAACGACCCAGAGAAGAA 23644 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || | | || |||||| | | |||| || Sbjct 23643 GATACCCTCGACAGCAGCGAAAGCGATCAGTCGGCAGGCAAAGGTCG---AATTCTTGTC 23587 Query 93271 ---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAG 93326 ||||||| || ||||| || || || || ||||| || | |||| ||||| | Sbjct 23586 AGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGA-TGTTATCGATGG 23528 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 |||| || || || ||||| | | || | ||||| || ||||| | ||| || | Sbjct 23527 CGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGT 23468 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | |||| || |||| |||||||| || |||||||||||||| |||| ||||| | Sbjct 23467 ATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTGCTTCAG 23408 Query 93447 TGATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505 ||||| ||||| || ||| | ||| || || || || ||||| || ||||| ||| Sbjct 23407 GTATCTGTACTTCACTGCTGAAA-CGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAT 23349 Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTA 93562 || || || ||||| | | || || || | | ||| ||||| || | ||| Sbjct 23348 GCGGCGAAGAAAGCAAGGACGTGTGAGATGAAGTATCGCTCGTCATCGTTCAATCTCTTG 23289 Query 93563 TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCT 93622 | ||| ||| || || || || ||||| | || || ||||||| || || ||||| Sbjct 23288 TTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCAGTCCAGAAGGACGCTTCA 23229 Query 93623 GCTTTTTTGTACATATCCCATAT 93645 ||||| |||||||| | |||||| Sbjct 23228 GCTTTCTTGTACATCTGCCATAT 23206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556842521044240