Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq635 120 6e-22 seq2106 107 4e-18 seq1850 89.7 1e-12 >seq635 Length=74236 Score = 120 bits (132), Expect = 6e-22 Identities = 473/729 (65%), Gaps = 35/729 (5%) Strand=Plus/Plus Query 293103 AAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCAC 293162 || ||||| |||||| | |||||||| || ||||||||||||||||| | | | || Sbjct 34307 AATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAGCAGCCATTTGGA-CAA 34365 Query 293163 TGTCTTCATAGA--GATCTCCCACGATGTCTTGTACACTGCCTTGACATCA----GGATG 293216 || ||| || ||| |||||| |||||||||| |||||||| ||| ||||| Sbjct 34366 TGG-TTCGCTGACTGATTTCCCACACAGTCTTGTACAATGCCTTGAGGTCATCTGGGATG 34424 Query 293217 AATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTC 293276 || ||| | | || ||||| || || | |||||| || |||||||||| |||| Sbjct 34425 TTTGG-AATG--CGT-TGAATAGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCTC 34480 Query 293277 GGACCAAGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTC 293336 |||||| ||||| | | ||| || || || | | ||||||||| ||||||| Sbjct 34481 GGACCAGAGACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGTTGACAACCTGGAACTC 34540 Query 293337 ACCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGA 293396 |||||| | || || ||||||||| |||| || ||| ||| | Sbjct 34541 ACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAA 34600 Query 293397 CCCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCAC 293456 || || |||| ||| || || || ||||| | || || ||||| | ||| Sbjct 34601 GCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGGGAGTTGCGCAC 34660 Query 293457 ACCCTTCTTGACACGCGAT-------TCGAGACCCGCCCAGTCC---AGAGCAGTCTGAG 293506 || | || || ||||| | |||| | ||||||||| ||| |||| | Sbjct 34661 CCCGTGCT---CA-GCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGAGATCAGT---TG 34713 Query 293507 GTGTAACACCCCAGAGATGATACTGCATGATACCCTTGCTGGCA--GGAGACCCCTCAAA 293564 | || |||||||| | || || || | |||||| || || || || || || | Sbjct 34714 GAGTGACACCCCACATATCGTATTGAAGTTCACCCTT--TGACACTGGTGAGCCTTCGTA 34771 Query 293565 GGTGGGATGGGGGCCATGCTCATCAGAGAGCTCGCAAGATGC-CTCAACAGCAGCAAAGT 293623 || | |||||| | | |||| ||||| || || || |||| || ||| || Sbjct 34772 CGTCTCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAA-GGCGGCATGGT 34830 Query 293624 AAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCT 293683 ||||| ||| ||||||| |||||| | || |||| | |||||| || ||||| Sbjct 34831 AAATGGTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCGAAGGGCATGC 34890 Query 293684 TCAGCTGGAAGAACACATCCTGCAGACCCTGTACACCTACACCAACGGGGCGACGACGCT 293743 || | ||| |||| |||||||| ||||| | ||| | |||||| |||| Sbjct 34891 GAAGAGCAAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGA 34950 Query 293744 TGTTGCTCGTCTCTGCCTCGGGAACCGCATATGCCATCACATCAATGCTCCTGTCCAGGT 293803 ||||||| || ||||| || || | ||| | | || ||| || ||| || || Sbjct 34951 AGTTGCTCTTCCTCGCCTCTGGCACAGGATAGTGGTTGATCTCGATGGTCTTGTTCAAGT 35010 Query 293804 TCTTCGTGA 293812 || | |||| Sbjct 35011 TCCTGGTGA 35019 >seq2106 Length=142898 Score = 107 bits (118), Expect = 4e-18 Identities = 271/403 (67%), Gaps = 8/403 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || || | |||||| | ||||| || ||||||||||||||| ||||| ||| Sbjct 24029 TCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATGAAGTCGAATGGGTTGGTG 23970 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | | ||| ||||| | || | |||||||| |||||||| | Sbjct 23969 GCGTTGTAGAACTTCTGGTTGCCGAGTGCCAACAACAGACGGTCTGCGACAAACTCGATG 23910 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||| | ||| || | | |||||||| | | | ||| || | || || || Sbjct 23909 TACTGGCACATGAGCTTGGCATTCATGCCGAGGAGCATGAC-GGGGAGCGCATCTGTGAG 23851 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 |||||| | || | || || ||||| | | || || ||| ||| | | Sbjct 23850 GAATTCTTGCTCAATTGCGACAGCCTCGACGATGATGCTCTGCACGAGTGATGCGTCCGG 23791 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGTCG 251859 |||||||| || | ||| |||| | || ||| || |||| ||||| |||||||| Sbjct 23790 CTTGTTCTTGAGGTGGGAGAACAGCAGGCACGCGAAGTCTGT--GTGCATGCCCTCGTCA 23733 Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919 || ||| || ||||| || | || || | ||| | ||||| ||| | | |||| Sbjct 23732 CGCGAGATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTCTTCAACCAG 23673 Query 251920 AAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||| | ||| || || |||||||| | | |||||||||| Sbjct 23672 AAGATGGACGC-GAACGACCCAGAGAAGAAGATACCCTCGACA 23631 >seq1850 Length=539074 Score = 89.7 bits (98), Expect = 1e-12 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || ||||| ||| | || || |||| ||||||||||| ||| Sbjct 382281 GGCGAGGATCTTTGCAACTGTACATTCAACTTGGCCTACGGTGCTAAGATTCTGCTCAAC 382222 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||||| | || | ||||||||||| | || || ||||| |||||||||| || | Sbjct 382221 TCTACACATCTGCGCCTCAAGCGTGGCCAGCGATACGGTCTGCTCGGTCCCAACGGTTCC 382162 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || |||| || || ||||| ||||| |||| ||| | || || || || || ||| Sbjct 382161 GGAAAGACTACGCTCATGCGTGCCATCAACAACGAGCAGGTCGAGGGCTTCCCCAA-GCA 382103 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556 || || | ||| || || || |||||||| Sbjct 382102 GAGCGAAGTCAAGACCGTCTACGTCGAGCACGA 382070 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| ||||||||| || || ||||| || |||||||| || |||| ||||| Sbjct 381466 CTCCCGTATTGCTGTCATTGGTCCGAACGGTGCCGGAAAGTCTACGCTCGTCAACGTCCT 381407 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTC-CGTTTGGAAGCATCCCAACATGCGGATGG 280278 ||||| ||| | | ||| | |||| ||| | |||| ||||| || || | Sbjct 381406 TACTGGTGAG-CTGATCCCAACCAAGGGTGACGTCTACCAGCACGAGAACATCCGTATCG 381348 Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338 | || || ||||| |||||| ||||| || ||||||| ||| |||| || Sbjct 381347 CATATATCAAGCAGCATGCTTTCGCTCACATTGATCACCACCTCGACTTGACCCCATCTG 381288 Query 280339 AATACATTCAGTGGCG 280354 | |||||||||||||| Sbjct 381287 AGTACATTCAGTGGCG 381272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027802217788466