Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1950 181 2e-40 seq2106 147 4e-30 seq1821 120 6e-22 seq2007 95.1 2e-14 seq2084 84.2 4e-11 >seq1950 Length=170036 Score = 181 bits (200), Expect = 2e-40 Identities = 184/238 (77%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || ||||| || || || || | |||||||| || ||| ||| || |||||||| || Sbjct 63717 TAGTTTCCACCACGCAGACGAAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAG 63658 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||| ||||||| || || || | |||||| || ||||| ||||| | || ||||| Sbjct 63657 TCGCTCAGTGTCCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCT 63598 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 ||||| ||||| ||||||||||||||||| | |||||| ||||||||||||| |||| Sbjct 63597 GGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGATGAT 63538 Query 68409 TCTACTTC----CAAG-GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| |||| ||||| || || || ||||| ||||||||||| |||||||| Sbjct 63537 TCCACTTCACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || |||||||| |||||||| Sbjct 63478 CCACCACGGAGACGAAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGAC 63419 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| || ||||| || | | || |||||||||||| Sbjct 63418 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGA 63359 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | |||||| || |||||||||| || || || Sbjct 63358 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCTGAAGACTCAACC 63299 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| |||||||||||||| || || ||||| Sbjct 63298 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 63252 >seq2106 Length=142898 Score = 147 bits (162), Expect = 4e-30 Identities = 300/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||| ||||||| |||||| | Sbjct 24066 CATGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAAAAGTTGGTCTTGCCGCC 24007 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || |||||| |||||||||||| || ||||| |||| | ||| ||| || Sbjct 24006 AAGAGAAATGTTCTCCATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCC 23947 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 |||||| || | ||||| || || |||||||||||||||| ||| || | | || Sbjct 23946 GAGTGCCAACAACAGACGGTCTGCGACAAACTCGATGTACTGGCACATGAGCTTGGCATT 23887 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | ||||| || || | ||| || | || | ||||| || Sbjct 23886 CATGCCGAGGAGCATGACGGGGAGCGCATCTGTGAGGAATTCTTGCTCAATTGCGACAGC 23827 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG-GGACAGCTTGTTCTCGAGCTTCGAATACA 10233 || ||| |||||||| || | || | | | | ||||||||| ||| | || ||| Sbjct 23826 CTCGACGATGATGCTCTGCACGA-GTGATGCGTCCGGCTTGTTCTTGAGGTGGGAGAACA 23768 Query 10234 GGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAA 10292 | || | || | ||| ||| | ||||||||| || ||| || ||||| || || Sbjct 23767 GCAGGCACGCGAAGT-CTGTGTGCATGCCCTCGTCACGCGAGATCAATTCGTTCGAGAAC 23709 Query 10293 CCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCGGA 10351 ||||||| |||||| || || || || |||||| |||| ||| ||||||||| || Sbjct 23708 GTGAGACCGGCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAACGACCCAGA 23650 Query 10352 GAACAGAAGACCCTCCAC 10369 ||| | | |||||| || Sbjct 23649 GAAGAAGATACCCTCGAC 23632 >seq1821 Length=46945 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||||||||| || || || | || | ||||| || |||||||| || ||||| || Sbjct 19298 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAGATC 19239 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || || || ||||| || || |||||||| || ||||| |||||| ||| Sbjct 19238 AGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 19179 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||||||||| || ||||| |||||||||||||| Sbjct 19178 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 19120 >seq2007 Length=19708 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| | |||||| |||||||| | ||||||| ||||| ||||| | ||||| || Sbjct 5910 ATGCCCTTCTTGTCCTGAATCTTGGGCTTGACGTTGTCGATAGTGTCGGAGGATTCAACC 5969 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct 5970 TCGAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGTAT 6016 >seq2084 Length=280932 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/127 (75%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427 |||| ||||| | |||||| || |||||||| | || || || || | |||||| | Sbjct 181133 CTTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTGATAG 181074 Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTATACCCAAGTATTTTTA 68487 | || |||||||||||||| ||||| |||||||| ||| | | |||||| || || Sbjct 181073 TCTTGCCCGTGAGGGTCTTTACGAAAATCTGCATCGTGC---TCTCCCCAAGGATGGTTC 181017 Query 68488 TTCAAAC 68494 ||||||| Sbjct 181016 TTCAAAC 181010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921592147744720