Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2106 286 7e-72 seq635 210 4e-49 >seq2106 Length=142898 Score = 286 bits (316), Expect = 7e-72 Identities = 579/845 (69%), Gaps = 16/845 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||| || | ||| |||||| || ||||||||||| ||| |||||||| Sbjct 23215 ATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTGTCCAAGGAC 23274 Query 42369 ACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425 || |||| | | | || || |||| | ||| || | || | || Sbjct 23275 CTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCACACGTCCTT 23334 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || ||||||||||| ||||| || || ||||| |||||||||| | |||| | Sbjct 23335 GCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAGCGTTTCAGCAGT 23394 Query 42486 GAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 || || ||| ||| | || || || ||||||||||| |||||||| || |||||| | Sbjct 23395 GAAGTACAGATACCT-GAAGCACGATGCTTCTACGGATTCCAGATCATGATGGAGAACAT 23453 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAA 42604 ||||| || ||| || || || |||| |||||| || ||| |||| Sbjct 23454 CCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAAGCAGCGATC 23513 Query 42605 CGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCT 42664 || ||||| ||||| || | || || || ||| |||||||| |||||||| | Sbjct 23514 ATATCTCTTCAACGCCATCGATAACATCCCATGTATCCGTAAGAAGGCTGACTGGGCATT 23573 Query 42665 CAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 |||||| | | || | || || | | | ||| | || || | || | Sbjct 23574 GCGATGGATCTCT-GACAAGAATTCGACCTTTGCCTGCCGACTGATCGCTTTCGCTGCTG 23632 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782 ||||||| ||||||||||| || | ||||| |||||||||||| | ||| || ||| Sbjct 23633 TCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTGAAGAAGCGTGGTC 23692 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || ||| |||| ||||| |||||||||||| | ||| | |||||||| |||| | Sbjct 23693 TC-ATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGGCATGCACACA 23751 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCGAAGGAGCGGGT 42901 ||||| || ||||| |||||||| |||||||| | ||||||| || | | | || Sbjct 23752 GACTTCGCGTGCCTGCTGTTCTC---CCACCTCAAGAACAAGCCGGACGCATCA-CTCGT 23807 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | | ||||||| ||||| || | || ||| | || |||||||| | |||| || Sbjct 23808 GCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACAGATGCGCTCCC 23867 Query 42962 CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 ||| || |||||||||| | | ||||||||| |||||||| ||| ||||| || Sbjct 23868 CGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAGA 23927 Query 43022 CCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080 || ||| || || || || ||| | |||||||| | | ||| ||||||| Sbjct 23928 CCGTCTGTTGTTGGCACTCGGCAACCAGAAG-TTCTACAACGCCACCAACCCATTCGACT 23986 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140 | ||||||||||| || | | |||||||||||||||||||||||||| || | |||| Sbjct 23987 TCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGACT 24046 Query 43141 ACCAG 43145 ||||| Sbjct 24047 ACCAG 24051 >seq635 Length=74236 Score = 210 bits (232), Expect = 4e-49 Identities = 1129/1765 (64%), Gaps = 67/1765 (4%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || ||| ||||| ||| | |||||| || || Sbjct 34523 GTTGACAACCTGGAACTCACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGG 34582 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| || ||||| || || | ||| ||||| ||||| || | ||| Sbjct 34583 CTCGAAGCACTCGTTGAAGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCAC 34642 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTG-GATGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 || || ||| | ||| |||||| || | ||| | | |||| | |||||||| Sbjct 34643 GAGAAGGGAGTTGCGCACCCCGTGC-TCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCC 34701 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 | | || || | | || || |||||||| || | || || ||||| Sbjct 34702 AGA-----GATCAGT--TGGAGT--GACACCCCACATATCGTATTGAAGTTCACCCTTTG 34752 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388 || || ||| ||||| ||| ||| || || || ||||||| |||| | Sbjct 34753 ACACTGGTGAGCCTTCGTACGTCTCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACG 34812 Query 244389 C-GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTT 244446 | ||| ||| |||| | ||| |||||||| |||||| ||| | ||| || |||| Sbjct 34813 CAGTCAAGG-CGGCATGGTAAATGGTCTCAAAGATCTGGACGTTGA-GTCTACGTGCCT- 34869 Query 244447 GCCGCAG-GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504 ||| || || |||||| |||| | | |||| | || || || ||||| || || Sbjct 34870 -CCGGAGAGTCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGACCCTGGACACCA 34928 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564 | |||||||| | ||| || |||| | | || || ||||| || || |||| Sbjct 34929 AGACCGATGGGGCGGTGACGGAAGTTGCTCTTCCTCGCCTCTGGCACAGGATAGTGGTTG 34988 Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624 ||||| |||||| | ||| | ||||| | | ||||| ||| ||| || Sbjct 34989 ATCTCGATGGTCTTGTTCAAGTTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTG 35048 Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 |||||||| || || | | ||| || | | | | ||| |||| Sbjct 35049 AAGTCGTA------GGTCTCGTTCTCAATG----TCAACGTATGTTGG--GAGAGCGATC 35096 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 |||||||||||||| || ||||| || | || ||||| | ||||| |||||| Sbjct 35097 GAAGCCAGGTTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGTGCAG 35156 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 ||||| || ||| ||||| |||| || || ||| |||| |||||| || ||| Sbjct 35157 AGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 35216 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| || ||||| || || || |||||| ||| || | |||| | || ||| | Sbjct 35217 TTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAATC 35276 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC--CTCGTAGCGGGTGTACAGGG 244922 | | || ||| ||| || ||| | ||| ||| |||||| | ||| || Sbjct 35277 TTCTGTGCGCGGACAGTCTCACG-GCCACGGCCT-TGCTTCTCGTACTGCTCGTAAAGCT 35334 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGAC 244982 |||||||| ||| |||| ||| | || || |||||| ||||||||||| Sbjct 35335 TTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGGCACATGAGGG 35394 Query 244983 TCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 |||| |||||| |||| || | || |||||| || || |||||||| || || || Sbjct 35395 TCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCGAAGA 35454 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCA 245101 | ||||| | | | || ||| ||| ||| || || | || |||| ||| | Sbjct 35455 AAAGGTCACGAGCGCGGACTTCTTCCTTGCC-GTGATTTTTGCGGAGGTCCATGAAGGCC 35513 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 ||||| || ||||||| ||||| | ||||| || | || || || ||||| ||||| Sbjct 35514 AAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTGCCA 35573 Query 245162 CCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217 ||||||| || | | ||||| |||| ||| || || | || || | || Sbjct 35574 CCCTGGT----CAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCC 35629 Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA 245277 ||| || |||||| ||||| ||| || | ||| | | | || ||| | |||| Sbjct 35630 GTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAGT---CGCGCGGATGC-GGTGGA 35685 Query 245278 C----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333 | | || | || || |||| ||| ||||| | ||| || |||||| ||||| Sbjct 35686 CGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCGT 35745 Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393 || ||||| |||||||| |||||||| || || |||||| |||| ||||| | | Sbjct 35746 AGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCAT 35805 Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGA 245453 | || | | | | |||| || ||||| ||||| || ||||| | | || | | Sbjct 35806 TAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACATGT 35865 Query 245454 ACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTC 245512 | ||| |||| | || || || | || |||||||| | || ||| | | Sbjct 35866 AGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGC-CACACGC 35924 Query 245513 ATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGC 245570 |||| | ||||| | ||| | || || | ||| | ||| | ||| || | Sbjct 35925 ATGATCATCTGCTGTG--GTCGCTCTGCAACCTTGCCGTCAATGCGGAGGAGGTACGATC 35982 Query 245571 GCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTG 245630 |||| | |||||||| ||||||||| |||| ||||| || || || ||||| Sbjct 35983 GCTCTAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCTG 36042 Query 245631 CGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGG 245688 | ||| ||| |||||||||| | |||| || | |||| | | || || | || Sbjct 36043 AATTGAG-CTCATCGGCGTGCTCCATGAC-CACTTTGTAAGTGTAGTCCGAGATCATAGG 36100 Query 245689 AGC-CCTGAGCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCAC-ACCTCCGAG 245746 || || | | || | || ||||| | | |||| ||| || || | ||| Sbjct 36101 CGCAGCTTTTCTC-GTCTTTGGGTTGACATAGTGGTAGAG-ATCTGAGACGACAGCAGAG 36158 Query 245747 AACTTGGGGCTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTTGCTG 245806 |||| | || |||| || ||||||| ||| || || ||||| || | || | Sbjct 36159 AACTGCTTCTTTGTCTGCTTGTGGAGGTTGGAGACGGCAATACGCGCGGCGAGAATGGCG 36218 Query 245807 TAGTCGGGGTGAGTGGTGGTCATGT 245831 ||||| ||||||||||||||||||| Sbjct 36219 TAGTCTGGGTGAGTGGTGGTCATGT 36243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944308202065760