Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 93.3 9e-14
seq1850 86.0 1e-11
>seq2106
Length=142898
Score = 93.3 bits (102), Expect = 9e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
|||||||| | | |||||| | ||||||||||| || || || ||||| | || |
Sbjct 23881 GGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAGACCGTCTGTTGTTG 23940
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
|| || || | |||| | |||||| ||| ||||| || | ||| |||||| ||||
Sbjct 23941 GCACTCGGCAACCAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACATT 24000
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGT 243747
|| ||| || || || ||||| ||||| |||||||| |||| || || |||||
Sbjct 24001 TCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGT 24060
Query 243748 GTGATG 243753
|| |||
Sbjct 24061 GTCATG 24066
>seq1850
Length=539074
Score = 86.0 bits (94), Expect = 1e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 333857 GTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTC 333916
|||||||||||| || |||||| | ||||| ||| | ||||||||| |||||
Sbjct 381784 GTTGATCAGGTAGTCTTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTTGGCTC 381843
Query 333917 GTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTT 333976
|||||| || || | | || ||| || | |||||| ||||| ||||| ||||| ||
Sbjct 381844 GTCAAGCAGAAGGATATCTGGCTTCTCGAAAACTGCACGCGCAAGGGCGAGCTTCATCTT 381903
Query 333977 CCACCCTCCTGAAAGAG 333993
||| || || |||||||
Sbjct 381904 CCAACCACCAGAAAGAG 381920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102842892913100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |