Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2106 93.3 9e-14 seq1850 86.0 1e-11 >seq2106 Length=142898 Score = 93.3 bits (102), Expect = 9e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 |||||||| | | |||||| | ||||||||||| || || || ||||| | || | Sbjct 23881 GGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCAGACCGTCTGTTGTTG 23940 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | |||| | |||||| ||| ||||| || | ||| |||||| |||| Sbjct 23941 GCACTCGGCAACCAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACATT 24000 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGT 243747 || ||| || || || ||||| ||||| |||||||| |||| || || ||||| Sbjct 24001 TCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGT 24060 Query 243748 GTGATG 243753 || ||| Sbjct 24061 GTCATG 24066 >seq1850 Length=539074 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 333857 GTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTC 333916 |||||||||||| || |||||| | ||||| ||| | ||||||||| ||||| Sbjct 381784 GTTGATCAGGTAGTCTTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTTGGCTC 381843 Query 333917 GTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTT 333976 |||||| || || | | || ||| || | |||||| ||||| ||||| ||||| || Sbjct 381844 GTCAAGCAGAAGGATATCTGGCTTCTCGAAAACTGCACGCGCAAGGGCGAGCTTCATCTT 381903 Query 333977 CCACCCTCCTGAAAGAG 333993 ||| || || ||||||| Sbjct 381904 CCAACCACCAGAAAGAG 381920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102842892913100