Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 96.9 3e-15
seq2084 84.2 2e-11
>seq1950
Length=170036
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || || | || || || || ||||| |||||||| |
Sbjct 63251 ACCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGA 63192
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || || ||||||||||| ||||||| |||||||| || |||||
Sbjct 63191 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGG 63132
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || || || || || ||| ||| || | || || || || ||
Sbjct 63131 AATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAAC 63072
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421
|| | || | ||||||||||||||
Sbjct 63071 CTCGAGGGTGATGGTCTTGCCGGTCA 63046
>seq2084
Length=280932
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || || | ||||| || || || |||||||| || |
Sbjct 181317 ACCACCACGCAGGCGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 181258
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| | ||||| |||||||||||||| | || | ||||||||||| || ||
Sbjct 181257 GAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 181198
Query 64336 AATTCCTTCTTTTTCT 64351
||||| || || |||
Sbjct 181197 GATTCCCTCCTTGTCT 181182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499628399159440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |