Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1950 96.9 3e-15 seq2084 84.2 2e-11 >seq1950 Length=170036 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | || || || || ||||| |||||||| | Sbjct 63251 ACCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGA 63192 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || || ||||||||||| ||||||| |||||||| || ||||| Sbjct 63191 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGG 63132 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || || || || || ||| ||| || | || || || || || Sbjct 63131 AATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAAC 63072 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421 || | || | |||||||||||||| Sbjct 63071 CTCGAGGGTGATGGTCTTGCCGGTCA 63046 >seq2084 Length=280932 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||||| || || || |||||||| || | Sbjct 181317 ACCACCACGCAGGCGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 181258 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| |||||||||||||| | || | ||||||||||| || || Sbjct 181257 GAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 181198 Query 64336 AATTCCTTCTTTTTCT 64351 ||||| || || ||| Sbjct 181197 GATTCCCTCCTTGTCT 181182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499628399159440