Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq635 219 4e-52
>seq635
Length=74236
Score = 219 bits (242), Expect = 4e-52
Identities = 609/929 (66%), Gaps = 10/929 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| ||| | ||| |||||||||||| || || |||
Sbjct 36016 AACTACCAGTACTTTGGCTTCAAGACTTTAGAGCGATCGTACCTCCTCCGCATTGACGGC 35957
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | |||||||| || ||| || | ||||| || || | || || ||||| |
Sbjct 35956 AAGGTTGCAGAGCGACCACAGCAGATGATCATGCGTGTGGCTGTTGGCATCCACGGTGAG 35897
Query 93835 GACAT----GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCAT 93890
|| || |||| | ||| | || || ||||| ||||| | ||
Sbjct 35896 GATATTGAGGCCGC---TATTGAGACCTA-CAACTACATGTCCAACAAGTACTTCACACA 35841
Query 93891 GGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT 93950
|| | || || || |||| ||| || || || | ||| | | || || || |
Sbjct 35840 CGCTTCGCCCACGCTTTTCAGCGCTGGTACGCCTAATGCTCAGCTCGCCTCATGCTTTTT 35781
Query 93951 GAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009
| | ||| | |||| ||| |||| || || | ||||| |||||| ||||| |
Sbjct 35780 GGTCGAC-ATGAAGGATGACAGCATCGAGGGTATCTACGACACTCTCAAGACTTGTGCCA 35722
Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069
|||||||| |||| || || || || ||| |||||| | | || || | || |
Sbjct 35721 TGATCTCAAAGAACGCAGGAGGCATTGGTCTCAACGTCCACCGCATCCGCGCGACTGGCT 35662
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| || ||| | || || || ||||| |||||||| || || || |||||||| |||| ||
Sbjct 35661 CGTATATCGGAGGCACGAACGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACA 35602
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
||||| | || |||||||| ||||||||||| | | | ||| |||| || |||
Sbjct 35601 ACAACACTGCTCGCTACGTTGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCT 35542
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| |||||||| |||||||| || || ||| ||||| ||||| || || || |||||||
Sbjct 35541 ACCTCGAGCCATGGCACGCTGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCA 35482
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || | | || | ||||| |||| ||| || ||| | ||||| || || ||||
Sbjct 35481 AGGAAGAAGTCCGCGCTCGTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGA 35422
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| || || ||| | ||| || |||| || | || |||||||| || || || ||
Sbjct 35421 AGCGTGTTGAGGAGAACGGCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCG 35362
Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429
|||| || | || | || ||| | | || | | ||||| ||| ||| |
Sbjct 35361 CCGATGTCTACGGCGAGGAGTTCGAAAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTG 35302
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| | || | | || |||| | ||| | ||| | || | ||| ||||
Sbjct 35301 GCCGTGAGACTGTCCGCGCACAGAAGATTTGGTACGCCATCCTTGAGGCTCAGACCGAGA 35242
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || || | |||| ||| |||||| || |||| |||| ||||||| || |||
Sbjct 35241 CTGGCGGCCCTTTCATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 35182
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || ||| ||||| || || ||||| ||||| | ||||| | |||| || |
Sbjct 35181 TTGGCACAATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATG 35122
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATC 94638
|| | ||||| || ||||||| || |||
Sbjct 35121 AGGTCGCTGTCTGCAACCTGGCTTCGATC 35093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494706960710960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |