Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq635 219 4e-52 >seq635 Length=74236 Score = 219 bits (242), Expect = 4e-52 Identities = 609/929 (66%), Gaps = 10/929 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| ||| | ||| |||||||||||| || || ||| Sbjct 36016 AACTACCAGTACTTTGGCTTCAAGACTTTAGAGCGATCGTACCTCCTCCGCATTGACGGC 35957 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | |||||||| || ||| || | ||||| || || | || || ||||| | Sbjct 35956 AAGGTTGCAGAGCGACCACAGCAGATGATCATGCGTGTGGCTGTTGGCATCCACGGTGAG 35897 Query 93835 GACAT----GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCAT 93890 || || |||| | ||| | || || ||||| ||||| | || Sbjct 35896 GATATTGAGGCCGC---TATTGAGACCTA-CAACTACATGTCCAACAAGTACTTCACACA 35841 Query 93891 GGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT 93950 || | || || || |||| ||| || || || | ||| | | || || || | Sbjct 35840 CGCTTCGCCCACGCTTTTCAGCGCTGGTACGCCTAATGCTCAGCTCGCCTCATGCTTTTT 35781 Query 93951 GAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 | | ||| | |||| ||| |||| || || | ||||| |||||| ||||| | Sbjct 35780 GGTCGAC-ATGAAGGATGACAGCATCGAGGGTATCTACGACACTCTCAAGACTTGTGCCA 35722 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 |||||||| |||| || || || || ||| |||||| | | || || | || | Sbjct 35721 TGATCTCAAAGAACGCAGGAGGCATTGGTCTCAACGTCCACCGCATCCGCGCGACTGGCT 35662 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | || ||| | || || || ||||| |||||||| || || || |||||||| |||| || Sbjct 35661 CGTATATCGGAGGCACGAACGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACA 35602 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| | || |||||||| ||||||||||| | | | ||| |||| || ||| Sbjct 35601 ACAACACTGCTCGCTACGTTGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCT 35542 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | |||||||| |||||||| || || ||| ||||| ||||| || || || ||||||| Sbjct 35541 ACCTCGAGCCATGGCACGCTGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCA 35482 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || | | || | ||||| |||| ||| || ||| | ||||| || || |||| Sbjct 35481 AGGAAGAAGTCCGCGCTCGTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGA 35422 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || ||| | ||| || |||| || | || |||||||| || || || || Sbjct 35421 AGCGTGTTGAGGAGAACGGCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCG 35362 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 |||| || | || | || ||| | | || | | ||||| ||| ||| | Sbjct 35361 CCGATGTCTACGGCGAGGAGTTCGAAAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTG 35302 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | || | | || |||| | ||| | ||| | || | ||| |||| Sbjct 35301 GCCGTGAGACTGTCCGCGCACAGAAGATTTGGTACGCCATCCTTGAGGCTCAGACCGAGA 35242 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || || | |||| ||| |||||| || |||| |||| ||||||| || ||| Sbjct 35241 CTGGCGGCCCTTTCATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 35182 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || ||| ||||| || || ||||| ||||| | ||||| | |||| || | Sbjct 35181 TTGGCACAATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATG 35122 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATC 94638 || | ||||| || ||||||| || ||| Sbjct 35121 AGGTCGCTGTCTGCAACCTGGCTTCGATC 35093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706960710960