Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq668 84.2 2e-11 >seq668 Length=263430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/223 (71%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 7555 CACGTGAAATTGTACGAGAATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGG 7614 ||||| |||||| ||| || || ||||| ||||| |||||||| | || |||| | || Sbjct 247520 CACGTAGAATTGTGCGAACATATGGCATGGCGGAAGTGCCATTTTCTTCAGGTCTGCTGG 247579 Query 7615 ATTCCACGCGCTCATTATAATGCGACGACTTGTAGGG-TCCTCTTTGATGGTGCGA-ATC 7672 ||||| || || | || ||||| ||| | ||| || || | || | | | || ||| Sbjct 247580 GTTCCAGGCACTGAGAATGATGCGTCGA-TCGTACGGATCGTTCTTCA-GCTTTGATATC 247637 Query 7673 ACTTGTTGCAAT-TGGTCGACCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGA 7731 |||| |||| || ||||| |||| || ||||| |||| ||| || ||| Sbjct 247638 ACTTCG-GCAAGCTGATCGACGCCTTGTCCGGTGTAGTCGGTGTGACAGTCCTTGTATTC 247696 Query 7732 TGCGCCAAAATGCCTCCATTGAAAACCGTAAATCGGACCTAAG 7774 ||||||||||| |||||||| || || |||| ||| || ||| Sbjct 247697 GGCGCCAAAATGTCTCCATTGGAAGCCATAAA-CGGGCCCAAG 247738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408230134431536