Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 176 7e-39
seq635 132 8e-26
>seq2106
Length=142898
Score = 176 bits (194), Expect = 7e-39
Identities = 544/829 (66%), Gaps = 17/829 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||||||||||||||||||||| | | || || |||||||| ||||||||||
Sbjct 24033 CTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATGAAGTCGAATGGGTT 23974
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| |||| | ||||| ||| || || | |||||| ||||| ||
Sbjct 23973 GGTGGCGTTGTAGAACTTCTGGTTGCCGAGTGCCAACAACAGACGGTCTGCGACAAACTC 23914
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| ||| || || || || ||| | ||||||||||| || |
Sbjct 23913 GATGTACTGGCACATGAGCTTGGCATTCATGCCGAGGAGCATGACGGGGAGCGCATCTGT 23854
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTT---CGGTCACAATCTGCGAGACACGTTCGTA 159885
|| || || | |||||| |||| || | || | | ||||| || | |||
Sbjct 23853 GAGGAATTCTTGCTCAATTGCGACAGCCTCGACGATGATGCTCTGCACGAGTGATGCGT- 23795
Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
|||||||| | || ||| ||||| |||||||| ||||| ||||| ||
Sbjct 23794 --CCGGCTTGTTC---TTGAGGTGGGAGAACAGCAGGCACGCGAAGTCTGTGTGCATGCC 23740
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
|||||| || ||||| || ||||| || | |||| || | ||||| |||||| ||
Sbjct 23739 CTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTCTT 23680
Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
| ||| || |||| ||| || | || || ||||| ||||| || || || || ||
Sbjct 23679 CAACCAGAAGATGGACGCGAACGACCCAGAGAAGAAGATACCCTCGACAGCAGCGAAAGC 23620
Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125
| || | |||| | | || ||||| | |||| | ||||| |||||
Sbjct 23619 GATCAGTCGGCAGGCAAAGGTCGAATTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGC 23560
Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCA 160184
|||||| ||| || || ||| |||| |||||| || | || || | ||| |||
Sbjct 23559 CTTCTTACGGATACATGGGATGTTATCGATGGCGTTGAAGAGATATGATC-GCTGCTTGG 23501
Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244
|| |||| || | || ||| ||||| |||| | ||| | || || ||
Sbjct 23500 GTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCA 23441
Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATA-CTGCACCTC-CTGTGTGAACCT 160302
||||| || |||||| || | || ||| || ||| || || ||| |||| |
Sbjct 23440 TGATCTGGAATCCGTAGAAGCATCGTG-CTTCAGGTATCTGTACTTCACTG-CTGAAACG 23383
Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362
| | |||| || | || || | || || | || || |||||||| | ||||| ||
Sbjct 23382 CTCAACCAGGTTCTCGTTGACAATTCCATCAGATGCGGCGAAGAAAGCAAGGACGTGTGA 23323
Query 160363 GATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCA 160421
|||||| | || |||||| | ||| | |||||| | ||||| ||| | ||| | || ||
Sbjct 23322 GATGAAGTATCGCTCGTCATCGTTCAATCTCTTGTTCCAGTCGTG-AAGGTCCTTGGACA 23264
Query 160422 AATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470
||||| ||| || || |||| || || | ||| | ||||||||
Sbjct 23263 GATCAATCTCCTCAGCAGTCCAGAAGGACGCTTCAGCTTTCTTGTACAT 23215
>seq635
Length=74236
Score = 132 bits (146), Expect = 8e-26
Identities = 459/705 (65%), Gaps = 11/705 (2%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896
||||| || || ||||||||||| | | ||||| | || ||| || |||||||||
Sbjct 34173 TCTTGGTCGACAGTGAACTGAATTGGTGCCGAGGCAGCCATGGTTCGGAGGTAGTACATG 34232
Query 203897 CCGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
|| ||||| || || || ||| ||||| | ||||||| | | |||| || | |
Sbjct 34233 CCAGTCTTGAGACCGAGCTTCCAGCCCGTGAA-GTGCATGCTCGTGATCTTGCCCATGGT 34291
Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015
||| || |||||||||||||| ||| || |||||||| | | ||||| ||
Sbjct 34292 GGGCTCCTTCATGTGAATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAGC 34351
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075
||||| | || |||||| ||| || |||||||| |||||| ||| | ||
Sbjct 34352 AGCCATTTGGACAATGGTTCGCTGACTGATTTCCCACACAGTCTTGTACAATGCCTTGAG 34411
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| | || | | || | | ||| | ||||| ||||| || | | ||
Sbjct 34412 GTCATCTGGGATGT-TTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCT 34470
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | ||| ||| | | ||| | || || ||| | || |||||||
Sbjct 34471 TCATGTTCTCGGACCAGA-GACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGTTGACA 34529
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | || ||||| || | | | | |||| | ||| |||| |||||
Sbjct 34530 ACCTGGAACTCACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAG 34589
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||||||| ||| | || |||| ||| || || ||||| || |||| ||| |||
Sbjct 34590 CACTCGTTGAAGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGG 34649
Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373
||||||||||| |||| | || |||| ||| |||| | |||||| | ||
Sbjct 34650 GAGTTGCGCACCCCGTGCTCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGAGATCA 34709
Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAA--AGATGCCTTGACTGACTGGGCTGCCCT 204431
| || | || |||||||| ||| | |||| | | ||||| ||||| ||| |
Sbjct 34710 GTTGGAGTGACACCCCACATATCGTATTGAAGTTCACCCTTTGAC--ACTGGTGAGCCTT 34767
Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491
||||||| || || | | || ||||||| || || || | || |||| ||
Sbjct 34768 CGTACGTCTCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCAT 34827
Query 204492 AGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTCCG 204536
||| ||||||||||||||||| ||||| | ||| |||||||
Sbjct 34828 GGTAAATGGTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCG 34872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795129099030560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |