Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2106 176 7e-39 seq635 132 8e-26 >seq2106 Length=142898 Score = 176 bits (194), Expect = 7e-39 Identities = 544/829 (66%), Gaps = 17/829 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||||||||||||||||||||| | | || || |||||||| |||||||||| Sbjct 24033 CTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATGAAGTCGAATGGGTT 23974 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| | ||||| ||| || || | |||||| ||||| || Sbjct 23973 GGTGGCGTTGTAGAACTTCTGGTTGCCGAGTGCCAACAACAGACGGTCTGCGACAAACTC 23914 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| ||| || || || || ||| | ||||||||||| || | Sbjct 23913 GATGTACTGGCACATGAGCTTGGCATTCATGCCGAGGAGCATGACGGGGAGCGCATCTGT 23854 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTT---CGGTCACAATCTGCGAGACACGTTCGTA 159885 || || || | |||||| |||| || | || | | ||||| || | ||| Sbjct 23853 GAGGAATTCTTGCTCAATTGCGACAGCCTCGACGATGATGCTCTGCACGAGTGATGCGT- 23795 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 |||||||| | || ||| ||||| |||||||| ||||| ||||| || Sbjct 23794 --CCGGCTTGTTC---TTGAGGTGGGAGAACAGCAGGCACGCGAAGTCTGTGTGCATGCC 23740 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| || ||||| || ||||| || | |||| || | ||||| |||||| || Sbjct 23739 CTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTCTT 23680 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 | ||| || |||| ||| || | || || ||||| ||||| || || || || || Sbjct 23679 CAACCAGAAGATGGACGCGAACGACCCAGAGAAGAAGATACCCTCGACAGCAGCGAAAGC 23620 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | || | |||| | | || ||||| | |||| | ||||| ||||| Sbjct 23619 GATCAGTCGGCAGGCAAAGGTCGAATTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGC 23560 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCA 160184 |||||| ||| || || ||| |||| |||||| || | || || | ||| ||| Sbjct 23559 CTTCTTACGGATACATGGGATGTTATCGATGGCGTTGAAGAGATATGATC-GCTGCTTGG 23501 Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244 || |||| || | || ||| ||||| |||| | ||| | || || || Sbjct 23500 GTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCA 23441 Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATA-CTGCACCTC-CTGTGTGAACCT 160302 ||||| || |||||| || | || ||| || ||| || || ||| |||| | Sbjct 23440 TGATCTGGAATCCGTAGAAGCATCGTG-CTTCAGGTATCTGTACTTCACTG-CTGAAACG 23383 Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362 | | |||| || | || || | || || | || || |||||||| | ||||| || Sbjct 23382 CTCAACCAGGTTCTCGTTGACAATTCCATCAGATGCGGCGAAGAAAGCAAGGACGTGTGA 23323 Query 160363 GATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCA 160421 |||||| | || |||||| | ||| | |||||| | ||||| ||| | ||| | || || Sbjct 23322 GATGAAGTATCGCTCGTCATCGTTCAATCTCTTGTTCCAGTCGTG-AAGGTCCTTGGACA 23264 Query 160422 AATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470 ||||| ||| || || |||| || || | ||| | |||||||| Sbjct 23263 GATCAATCTCCTCAGCAGTCCAGAAGGACGCTTCAGCTTTCTTGTACAT 23215 >seq635 Length=74236 Score = 132 bits (146), Expect = 8e-26 Identities = 459/705 (65%), Gaps = 11/705 (2%) Strand=Plus/Plus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 ||||| || || ||||||||||| | | ||||| | || ||| || ||||||||| Sbjct 34173 TCTTGGTCGACAGTGAACTGAATTGGTGCCGAGGCAGCCATGGTTCGGAGGTAGTACATG 34232 Query 203897 CCGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 || ||||| || || || ||| ||||| | ||||||| | | |||| || | | Sbjct 34233 CCAGTCTTGAGACCGAGCTTCCAGCCCGTGAA-GTGCATGCTCGTGATCTTGCCCATGGT 34291 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015 ||| || |||||||||||||| ||| || |||||||| | | ||||| || Sbjct 34292 GGGCTCCTTCATGTGAATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAGC 34351 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 ||||| | || |||||| ||| || |||||||| |||||| ||| | || Sbjct 34352 AGCCATTTGGACAATGGTTCGCTGACTGATTTCCCACACAGTCTTGTACAATGCCTTGAG 34411 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || | || | | || | | ||| | ||||| ||||| || | | || Sbjct 34412 GTCATCTGGGATGT-TTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCT 34470 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | ||| ||| | | ||| | || || ||| | || ||||||| Sbjct 34471 TCATGTTCTCGGACCAGA-GACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGTTGACA 34529 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | || ||||| || | | | | |||| | ||| |||| ||||| Sbjct 34530 ACCTGGAACTCACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAG 34589 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| ||| | || |||| ||| || || ||||| || |||| ||| ||| Sbjct 34590 CACTCGTTGAAGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGG 34649 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 ||||||||||| |||| | || |||| ||| |||| | |||||| | || Sbjct 34650 GAGTTGCGCACCCCGTGCTCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGAGATCA 34709 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAA--AGATGCCTTGACTGACTGGGCTGCCCT 204431 | || | || |||||||| ||| | |||| | | ||||| ||||| ||| | Sbjct 34710 GTTGGAGTGACACCCCACATATCGTATTGAAGTTCACCCTTTGAC--ACTGGTGAGCCTT 34767 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||||||| || || | | || ||||||| || || || | || |||| || Sbjct 34768 CGTACGTCTCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCAT 34827 Query 204492 AGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTCCG 204536 ||| ||||||||||||||||| ||||| | ||| ||||||| Sbjct 34828 GGTAAATGGTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCG 34872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795129099030560