Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1950 122 1e-22 seq2084 102 9e-17 seq491 96.9 4e-15 seq2167 84.2 2e-11 >seq1950 Length=170036 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || || || | || ||||| |||||||| ||||| Sbjct 63443 CTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAA 63384 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | | |||||||||| ||||| ||||| | Sbjct 63383 GATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACATT 63324 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| || || || || || || || Sbjct 63323 GTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 63264 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 63263 AAAGATTTGCAT 63252 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| |||| || |||||||| ||||| ||||||||| || || || | Sbjct 63700 ACGAAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCC 63641 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| || ||||| || | |||||||||||| | || | || |||||| Sbjct 63640 GTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTT 63581 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC-----CACATCCACC 46552 ||| |||||| ||||| | | | ||||| ||||| ||| || | Sbjct 63580 GTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGATGATTCCACTTCACTTCAAGT 63521 Query 46553 GTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || ||||| || || || || || ||||| ||||| Sbjct 63520 GTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480 Score = 104 bits (114), Expect = 3e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || |||||||| || || |||||||| |||| ||||| |||||||||||||| Sbjct 63215 CTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 63156 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | | |||||||||| |||||| |||| | | Sbjct 63155 AATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATT 63096 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | |||||| || || || || | |||||||| ||||| |||| Sbjct 63095 GTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCA 63046 >seq2084 Length=280932 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| | || |||||||||||||||||||| Sbjct 181281 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 181222 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||||||||||| | || | | ||||||||| Sbjct 181221 GATCAAGCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTC 181183 >seq491 Length=81577 Score = 96.9 bits (106), Expect = 4e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || | | | ||||||||||| || ||||| ||||| ||||| ||||||| |||||| Sbjct 41578 CTCTTTCTAGGTGTTGTAGTCGGAGAGGGTGCGGTCGTCCTCGAGTTGCTTGCTGGCGAA 41519 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||| ||| || | |||||||||||| ||| Sbjct 41518 GATCAAGCGCTGCTAGTCTAGTGGGATGCTCTCCTTGTCGATG 41476 >seq2167 Length=8863 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46406 TTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 46465 || ||||| ||||||||||| || || || ||||| ||||| | |||||| ||||| || Sbjct 5425 TTCTGGATGTTGTAGTCGGAAAGGGTACGGTCGTCCTCGAGTTACTTGCCAGCGAAGATT 5484 Query 46466 AAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||| ||||||||| | || | | ||||||||| ||| Sbjct 5485 AAGCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCAATG 5523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565219846049520