Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq913 279 7e-70 seq2095 129 7e-25 seq1112 107 2e-18 >seq913 Length=65256 Score = 279 bits (308), Expect = 7e-70 Identities = 490/711 (69%), Gaps = 12/711 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||||||| || || || || |||| || || || |||||||| Sbjct 41040 TCGAAGTCCTCTCCACCCAAGTGAGTGTCTCCTGCAGTCGACTTCACCTCGAAGATACCC 41099 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | ||| || ||||| || || |||||||||| ||| || ||||| ||| Sbjct 41100 TCCTCGATGGTGAGCAAGGAGACATCGAATGTGCCACCACCCAAGTCGAAGATGAGCACG 41159 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || | ||||| ||||||||||| || || || || || ||||| || Sbjct 41160 TTGCGCTCACCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCAGCTGCGGTTGGCTCG 41219 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || ||| ||| ||||| || || | ||||| || || |||||||| Sbjct 41220 TTGATGATGCGGAGAACGTTGAGGCCGGCGATGAGACCAGCATCCTTGGTTGCTTGTCGC 41279 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| |||||||| || ||||| |||| | || | ||||| Sbjct 41280 TGCGAGTCGTTGAAGTATGCCGGGACAGTAACGACTGCGTTGTTAACAGTGCCGCCGAGG 41339 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| || ||||| ||||| ||||| || | | Sbjct 41340 TAGGACTCAGCAGTCTCGCGCATCTTGGTGAGGACCATGGATGAGATCTCCTCTGGTGTG 41399 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 || ||| || || || || || || | | | || || || |||| | Sbjct 41400 AAAGTCTTCTCCTCGCCCTTGAATTCGACCTGGACGACTGGCTT----GC--CACCCTTG 41453 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| ||||| | | | | ||||| || | || || | |||| | ||||| Sbjct 41454 TCGATGACCTTGAAGGGGAAGTGCTTCATGTCTGCCTGCACTTCGGGGTCTGCGAACTTG 41513 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| | ||||| || || || || ||||| | ||||||||||| ||||||| Sbjct 41514 CGGCCGATTAATCGCTTGGCGTCGAAGACGGTGTTGTGTGGGTTCATGGCGACTTGGTTC 41573 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| ||||| ||||| || | | || || || || ||| |||| || ||| Sbjct 41574 TTTGCAGCGTCACCGATGAGACGCTC---AGTGTCGGTGAAGGCAACGAACGAGGGTGTC 41630 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 ||||| || || |||||||| ||||| || || | ||||| | | ||| || ||| Sbjct 41631 GTTCGGTTACCCTGGTCGTTGGCAATGATCTCAATACGGTCATCTCTGAAGATACCCACG 41690 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATAT 8164 || || ||||| || || ||||| ||||| |||||| | | ||| || ||| Sbjct 41691 CAAGAGTACGTGGTACCCAAATCGATACCAATTGCTGGTGCCATGTTGTAT 41741 >seq2095 Length=144109 Score = 129 bits (142), Expect = 7e-25 Identities = 218/315 (69%), Gaps = 3/315 (1%) Strand=Plus/Minus Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || || || || ||||| |||| ||| || | |||| Sbjct 8176 ACCACCCAAGTGAGTGTCACCAGCAGTAGCCTTGACAGTGAAGACACCGCCCTGGATGTG 8117 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | ||||||||||| || |||||||| || || | || || ||||| || | Sbjct 8116 AAGGAGGGAAACATCAAAAGTTCCACCACCAAGATCGTAGATCAGGACGTTTCGCTCCTT 8057 Query 7588 GTCT---TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 ||| ||| | |||||||||| |||||||| || || || || || || || || Sbjct 8056 GTCGGACTTGCCGGAACCGAGACCGTAGGCGATAGCGGCAGCGGTAGGCTCGTTGATGAT 7997 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 ||| || ||| ||||||||||| | | ||||| || || || |||| || || Sbjct 7996 ACGGAGGACGTTGAGGCCAGCAATGGCACCGGCATCCTTGGTAGCCTGTCTCTGGTTGTC 7937 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| ||||||||||| || || | ||| || | | ||| ||||| ||||| | | || Sbjct 7936 GTTGAAGTAGGCCGGCACAGTGATGACGGCCTTGGAGACCTTCTTGCCGAGCTTGGTCTC 7877 Query 7765 CGCGATATCTTTCAT 7779 |||| || ||||| Sbjct 7876 AGCGACCTCCTTCAT 7862 >seq1112 Length=541625 Score = 107 bits (118), Expect = 2e-18 Identities = 227/330 (69%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| ||||||||||| | || || || || || || || | || || |||| ||| Sbjct 80746 ATCGAAGTCTTCACCACCAAGATGGGTGTCACCAGCCGTAGCCTGAACCTCGAAGACACC 80687 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| | | | || || ||||| ||||||||||| || || | | || | Sbjct 80686 CTGGTCAACAGTCAGGATGGAGACGTCAAAAGTACCACCACCAAGATCGTAGACGATGAT 80627 Query 7576 GTT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | ||| || ||| | ||| ||||||||||| |||| ||| || || || |||| Sbjct 80626 TTGGCGT-TCCCGGTCAGT---CTTGTCGAGACCGTAGGCGAGAGCGGCGGCAGTAGGTT 80571 Query 7635 CATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || | || || || ||| || ||||| || ||||| | ||||| || || || Sbjct 80570 CGTTGACAACTCGCAGCACA-TTGAGGCCTGCGATAGTACCGGCATCCTTGGTGGCAGCG 80512 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG-ACTTTCTTACC 7752 || || | ||||| |||||||| || || || || || |||| ||| || |||| ||| Sbjct 80511 CGCTGAGCGTCGTTGAAGTAGGCAGGAACAGTGACAACTGCGT-TGTGAACCTTCTCACC 80453 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTT 7782 ||||| || || |||| || |||||||| Sbjct 80452 AAGATAGGACTCGGCGACCTCCTTCATTTT 80423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635111951765840