Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq913 279 7e-70
seq2095 129 7e-25
seq1112 107 2e-18
>seq913
Length=65256
Score = 279 bits (308), Expect = 7e-70
Identities = 490/711 (69%), Gaps = 12/711 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || ||||||||||| || || || || |||| || || || ||||||||
Sbjct 41040 TCGAAGTCCTCTCCACCCAAGTGAGTGTCTCCTGCAGTCGACTTCACCTCGAAGATACCC 41099
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | ||| || ||||| || || |||||||||| ||| || ||||| |||
Sbjct 41100 TCCTCGATGGTGAGCAAGGAGACATCGAATGTGCCACCACCCAAGTCGAAGATGAGCACG 41159
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || | ||||| ||||||||||| || || || || || ||||| ||
Sbjct 41160 TTGCGCTCACCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCAGCTGCGGTTGGCTCG 41219
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || ||| ||| ||||| || || | ||||| || || ||||||||
Sbjct 41220 TTGATGATGCGGAGAACGTTGAGGCCGGCGATGAGACCAGCATCCTTGGTTGCTTGTCGC 41279
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
||||| ||||| ||||| |||||||| || ||||| |||| | || | |||||
Sbjct 41280 TGCGAGTCGTTGAAGTATGCCGGGACAGTAACGACTGCGTTGTTAACAGTGCCGCCGAGG 41339
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || ||| ||||| || ||||| ||||| ||||| || | |
Sbjct 41340 TAGGACTCAGCAGTCTCGCGCATCTTGGTGAGGACCATGGATGAGATCTCCTCTGGTGTG 41399
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873
|| ||| || || || || || || | | | || || || |||| |
Sbjct 41400 AAAGTCTTCTCCTCGCCCTTGAATTCGACCTGGACGACTGGCTT----GC--CACCCTTG 41453
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
||| ||||| | | | | ||||| || | || || | |||| | |||||
Sbjct 41454 TCGATGACCTTGAAGGGGAAGTGCTTCATGTCTGCCTGCACTTCGGGGTCTGCGAACTTG 41513
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| ||||| | ||||| || || || || ||||| | ||||||||||| |||||||
Sbjct 41514 CGGCCGATTAATCGCTTGGCGTCGAAGACGGTGTTGTGTGGGTTCATGGCGACTTGGTTC 41573
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || ||||| ||||| ||||| || | | || || || || ||| |||| || |||
Sbjct 41574 TTTGCAGCGTCACCGATGAGACGCTC---AGTGTCGGTGAAGGCAACGAACGAGGGTGTC 41630
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
||||| || || |||||||| ||||| || || | ||||| | | ||| || |||
Sbjct 41631 GTTCGGTTACCCTGGTCGTTGGCAATGATCTCAATACGGTCATCTCTGAAGATACCCACG 41690
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATAT 8164
|| || ||||| || || ||||| ||||| |||||| | | ||| || |||
Sbjct 41691 CAAGAGTACGTGGTACCCAAATCGATACCAATTGCTGGTGCCATGTTGTAT 41741
>seq2095
Length=144109
Score = 129 bits (142), Expect = 7e-25
Identities = 218/315 (69%), Gaps = 3/315 (1%)
Strand=Plus/Minus
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||||||| || || || || || || ||||| |||| ||| || | ||||
Sbjct 8176 ACCACCCAAGTGAGTGTCACCAGCAGTAGCCTTGACAGTGAAGACACCGCCCTGGATGTG 8117
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| | ||||||||||| || |||||||| || || | || || ||||| || |
Sbjct 8116 AAGGAGGGAAACATCAAAAGTTCCACCACCAAGATCGTAGATCAGGACGTTTCGCTCCTT 8057
Query 7588 GTCT---TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644
||| ||| | |||||||||| |||||||| || || || || || || || ||
Sbjct 8056 GTCGGACTTGCCGGAACCGAGACCGTAGGCGATAGCGGCAGCGGTAGGCTCGTTGATGAT 7997
Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704
||| || ||| ||||||||||| | | ||||| || || || |||| || ||
Sbjct 7996 ACGGAGGACGTTGAGGCCAGCAATGGCACCGGCATCCTTGGTAGCCTGTCTCTGGTTGTC 7937
Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764
||| ||||||||||| || || | ||| || | | ||| ||||| ||||| | | ||
Sbjct 7936 GTTGAAGTAGGCCGGCACAGTGATGACGGCCTTGGAGACCTTCTTGCCGAGCTTGGTCTC 7877
Query 7765 CGCGATATCTTTCAT 7779
|||| || |||||
Sbjct 7876 AGCGACCTCCTTCAT 7862
>seq1112
Length=541625
Score = 107 bits (118), Expect = 2e-18
Identities = 227/330 (69%), Gaps = 9/330 (3%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||| ||||||||||| | || || || || || || || | || || |||| |||
Sbjct 80746 ATCGAAGTCTTCACCACCAAGATGGGTGTCACCAGCCGTAGCCTGAACCTCGAAGACACC 80687
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|||| | | | || || ||||| ||||||||||| || || | | || |
Sbjct 80686 CTGGTCAACAGTCAGGATGGAGACGTCAAAAGTACCACCACCAAGATCGTAGACGATGAT 80627
Query 7576 GTT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| ||| || ||| | ||| ||||||||||| |||| ||| || || || ||||
Sbjct 80626 TTGGCGT-TCCCGGTCAGT---CTTGTCGAGACCGTAGGCGAGAGCGGCGGCAGTAGGTT 80571
Query 7635 CATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
| || | || || || ||| || ||||| || ||||| | ||||| || || ||
Sbjct 80570 CGTTGACAACTCGCAGCACA-TTGAGGCCTGCGATAGTACCGGCATCCTTGGTGGCAGCG 80512
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG-ACTTTCTTACC 7752
|| || | ||||| |||||||| || || || || || |||| ||| || |||| |||
Sbjct 80511 CGCTGAGCGTCGTTGAAGTAGGCAGGAACAGTGACAACTGCGT-TGTGAACCTTCTCACC 80453
Query 7753 GAGATACGATTCCGCGATATCTTTCATTTT 7782
||||| || || |||| || ||||||||
Sbjct 80452 AAGATAGGACTCGGCGACCTCCTTCATTTT 80423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635111951765840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |